Skip to another splice site:
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCCTTTCTCTAAGAAGGATTGGTATGACATCAAGGCACCGTCGGTGTTCAGTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgtttttttttgactatcgatattttttcgtactgcccctacattgtgtgttgtgaacttgcgcatatatgcatgtgtatgtagaccgcgctagtca...

Basic information

species Zea mays
transcript GRMZM2G030915_T03
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G030915_T03 (Zea mays), 5'ss of exon 2
lower sequence: PP1S92_47V6.2 (Physcomitrella patens), 5'ss of exon 2
CCCTTTCTCTAAGAAGGATTGGTATGACATCAAGGCACCGTCGGTGTTCAGTGTGCGCAACATCGGGAA-GACTCTCGTATCCAGGACACAGGGTACCAGGgta--tgtttttttttgactatcgatattttttcgtactgc-ccctacattgtgtgtt-gtgaacttgcgcatatatgcatgtgtatgtagaccgcgctagtca
 |||||||| |||||||| |||||||| |||||||||||     | ||||  |       | | ||||| |||||| ||  | |||||    || |||| |||   ||   ||||||  ||||   |    |||  ||||      |  ||| | | || | | | || ||   || |   |   | |||    |||  | ||  
TCCTTTCTCCAAGAAGGACTGGTATGATATCAAGGCACCCAATATCTTCA-CGCAAAAGGCGTTGGGAAAGACTCTTGTGACAAGGACTGCCGGCACCAAGgttattgccattttttttctattttttccgttttttactttattttttattttatctttgaggattttcgatgatttttgt---tgtgtgtctcgcattcgta-

upper sequence: GRMZM2G030915_T03 (Zea mays), 5'ss of exon 2
lower sequence: PP1S80_120V6.1 (Physcomitrella patens), 5'ss of exon 2
CCCTTTCTCTAAGAAGGATTGGTATGACATCAAGGCACCGTCGGTGTTCA-GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatg--tttttttttgacta--tcgatattttttcgtactgcccctacattgtgtgt-tgtgaact-tgcgcatatatgcatgtgtatgtagaccgcgctagtca----------------------------------------
 |||||||| |||||||||||||||||||||||||| ||       |||| |     |   | | |||||||| || ||  |||||||   |||||||| |||| |    |  |  ||  |   |||   | | | | |  || |  |  |||| |||   ||    |   ||||    ||  || ||  | |    | |  ||                                           
TCCTTTCTCGAAGAAGGATTGGTATGACATCAAGGCCCCCAACACCTTCACGCAGAAGTCGC-TGGGGAAGACCCTGGTGACCAGGACCGCGGGTACCAAGgtaagagcatgctgctgggtgggtcggggtgtgtgcatggtggcggtgaattgagtggacgtagggtgcacgcagcattgattgggtgcgaatgtggtggaagaattgtggggttgacgagaggggtgttgcgtggggcgcaacag

upper sequence: GRMZM2G030915_T03 (Zea mays), 5'ss of exon 2
lower sequence: PP1S219_50V6.1 (Physcomitrella patens), 5'ss of exon 2
CCCTTTCTCTAAGAAGGATTGGTATGACATCAAGGCACCGTCGGTGTTCAGTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgtttttttttgactatcg-atattttttcgtac-tgcccctacat---tgtgtgttgtgaacttgcgcatatatgcatgtgtatgtagaccgcgctagtca
 |||||||| |||||||| ||||||||||||||||||||       ||||    |   ||  | ||||||||||||||  | |||||   ||| || | || |  |   | ||    | ||  |||| | |   ||  |     || ||   | | |||| ||   ||   | |    |    |  || |    | |  | |   
TCCTTTCTCCAAGAAGGACTGGTATGACATCAAGGCACCCAACACCTTCACGCAGAAGAATTTGGGGAAGACTCTCGTCACTAGGACCGCGGGAACTAAGgcaattagctcttcagatgtcttatatatatatatatatatatatatatatatatatgttttgggtttcttcgttagggt---ttcatttttgtctcattggg--

upper sequence: GRMZM2G030915_T03 (Zea mays), 5'ss of exon 2
lower sequence: PP1S179_15V6.1 (Physcomitrella patens), 5'ss of exon 2
CCCTTTCTCTAAGAAGGATTGGTATGACATCAAGGCACCGTCGGTGTTCAGTGTGCGCAACATCGGG-AAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatg----ttt--ttttttgactatcgatattttttcgtactgcccctaca-ttgtgtgt---tgtgaacttgcgcatatatgc-atgtgtatgtagaccgcgctagtca----------------------------
 |||||||| |||||||||||||||||||||||||| ||       ||||  |       | | ||| ||||| |||||  |||||||   |||||||| |||  |    |||  || ||||  | |   ||||| || ||        || | ||| || |   | ||| || |      ||| |  ||  | | |  |    |||  | |                            
TCCTTTCTCCAAGAAGGATTGGTATGACATCAAGGCTCCTAACACCTTCA-CGCAGAAGTCGTTGGGGAAGACCCTCGTCACCAGGACGGCGGGTACCAAGgtgcgagggtttgattgtttgtttgtttttatttatttgtttgtttattaaagttgggtttatctctgacctggtatggttatactgtgcatttctgtaattagcttctgatgagaggttttgtttgtttgggtttcag

upper sequence: GRMZM2G030915_T03 (Zea mays), 5'ss of exon 2
lower sequence: PP1S46_147V6.1 (Physcomitrella patens), 5'ss of exon 2
CCCTTTCTCTAAGAAGGATTGGTATGACATCAAGGCACCGTCGGTGTTCAGTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgt--------atgtttttttttgactatcgatattttttcgtactgcccctacattgtgtg-----ttg--tgaacttgcgcatatatgc-----atgtgtatgtagaccgcgctagtca--------------------------------------
 || ||||| |||||||||||||||||||||||||||||       |||| |      ||| | || |||||||||||  |||||||   ||| || | |||        ||| || | | |  |  ||  | | | |   |    | ||| | |   |||     |||  |||| |||  ||| ||||      |||  || |       |  | || |                                      
TCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGAACGAAGgtggggggttatgcttctctctctcgctctgtttgtgtgtatctctcgcctccgtcccgtggggatttgattgaagttggacatttatgagagagatggatacgcttttttcttttgtgaagttgtacacggaactgacgcgggtttggatgcgacag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|31353368|gb|CD437725.1|CD437725
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|6021360|gb|AW066288.1|AW066288
EST:     CTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: CTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|18384905|gb|BM418104.1|BM418104
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|14701519|gb|BI233937.1|BI233937
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGGTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGGTTGGCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211139459|gb|FL274602.1|FL274602
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTKAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|32826770|gb|CD966448.1|CD966448
EST:     TGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGA
genomic: TGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTA-CCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGA
EST: gi|211503787|gb|FL027606.1|FL027606
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|32827185|gb|CD966863.1|CD966863
EST:     TGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGA
genomic: TGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTA-CCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGA
EST: gi|32912597|gb|CF017409.1|CF017409
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|31356054|gb|CD440411.1|CD440411
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211225942|gb|FL178505.1|FL178505
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211476038|gb|FL363768.1|FL363768
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|31354818|gb|CD439175.1|CD439175
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|149071185|gb|EE159581.2|EE159581
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|148930920|gb|EC873393.2|EC873393
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|60340951|gb|DN207924.1|DN207924
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211506150|gb|FL027627.1|FL027627
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211227997|gb|FL178515.1|FL178515
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|60352234|gb|DN219207.1|DN219207
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|32916598|gb|CF021410.1|CF021410
EST:     TGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGA
genomic: TGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTA-CCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGA
EST: gi|29576952|gb|CB617064.1|CB617064
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTTTTGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|31356179|gb|CD440536.1|CD440536
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|20301056|gb|BQ163999.1|BQ163999
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGA
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGA
EST: gi|22489400|gb|BU049323.1|BU049323
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|31362046|gb|CD446403.1|CD446403
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|15198882|gb|BI423537.1|BI423537
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|60350414|gb|DN217387.1|DN217387
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|67043280|gb|CO469535.1|CO469535
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211105183|gb|FL178439.1|FL178439
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|6021229|gb|AW066157.1|AW066157
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|6137990|gb|AW134444.1|AW134444
EST:     CGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: CGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|19436586|gb|BM952996.1|BM952996
EST:     AAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: AAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211449446|gb|FL371198.1|FL371198
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211100240|gb|FL178421.1|FL178421
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTARCTGAW
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211102713|gb|FL178430.1|FL178430
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|30705565|gb|CD058824.1|CD058824
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211256025|gb|FL134863.1|FL134863
EST:     GGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|149065517|gb|EE286636.2|EE286636
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|60396576|gb|DN229445.1|DN229445
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|213168103|gb|FM193545.1|FM193545
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|149105849|gb|EE291448.2|EE291448
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211221816|gb|FL178475.1|FL178475
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211358404|gb|FL178579.1|FL178579
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAKGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211137573|gb|FL274581.1|FL274581
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|148969542|gb|EE020369.2|EE020369
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211139455|gb|FL274598.1|FL274598
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|71438894|gb|DR819944.1|DR819944
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|30087328|gb|CB885534.1|CB885534
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|148943459|gb|EC888518.2|EC888518
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|32916144|gb|CF020956.1|CF020956
EST:     TGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGA
genomic: TGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTA-CCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGA
EST: gi|148973820|gb|EE024956.2|EE024956
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|31361262|gb|CD445619.1|CD445619
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211501454|gb|FL027601.1|FL027601
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|6020764|gb|AW065572.1|AW065572
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|60397617|gb|DN230433.1|DN230433
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211232129|gb|FL178547.1|FL178547
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|21987783|gb|BQ779311.1|BQ779311
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|29543600|gb|CB603980.1|CB603980
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|19821913|gb|BQ047937.1|BQ047937
EST:     GGGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|60355112|gb|DN222085.1|DN222085
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|21843334|gb|BQ703915.1|BQ703915
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211105182|gb|FL178438.1|FL178438
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|31359093|gb|CD443450.1|CD443450
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|9731752|gb|BE510504.1|BE510504
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|29167994|gb|CB411254.1|CB411254
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|13198176|gb|BG354190.1|BG354190
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|67023320|gb|CO452069.1|CO452069
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|30307002|gb|CD001675.1|CD001675
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211228008|gb|FL178526.1|FL178526
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211159066|gb|FL345408.1|FL345408
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|91050263|gb|EB160681.1|EB160681
EST:     AGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: AGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|31612042|gb|CD568664.1|CD568664
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|148954706|gb|EC900158.2|EC900158
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211501450|gb|FL027597.1|FL027597
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|91050264|gb|EB160682.1|EB160682
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|15053372|gb|BI358917.1|BI358917
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|32864608|gb|CF004290.1|CF004290
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211137561|gb|FL274569.1|FL274569
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211139465|gb|FL274608.1|FL274608
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|14883675|gb|BI273483.1|BI273483
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211061244|gb|FL324131.1|FL324131
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCYTTTGAGGTTTGCCTAGCTGA
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTC-TTTGAGGTTTGCCTAGCTGA
EST: gi|14191081|gb|BG833311.1|BG833311
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|31664450|gb|CD573383.1|CD573383
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|148932349|gb|EC875973.2|EC875973
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|9952104|gb|BE638687.1|BE638687
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|31612049|gb|CD568671.1|CD568671
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211221813|gb|FL178472.1|FL178472
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|31558565|gb|CD527777.1|CD527777
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|28930913|gb|CB334274.1|CB334274
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGA
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTT-CTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGA
EST: gi|148963894|gb|EE015004.2|EE015004
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211418056|gb|FL027587.1|FL027587
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|37399760|gb|CF637215.1|CF637215
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|40334481|gb|CK368551.1|CK368551
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211230062|gb|FL178528.1|FL178528
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|60343808|gb|DN210781.1|DN210781
EST:     CCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: CCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|29130531|gb|CB381235.1|CB381235
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|30031671|gb|CB833522.1|CB833522
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|32865453|gb|CF005135.1|CF005135
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211138516|gb|FL274591.1|FL274591
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211221812|gb|FL178471.1|FL178471
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|37396825|gb|CF635707.1|CF635707
EST:     GCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGTTTTTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|21843173|gb|BQ703769.1|BQ703769
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|60337041|gb|DN204014.1|DN204014
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|15053835|gb|BI359380.1|BI359380
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211418057|gb|FL027588.1|FL027588
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211230068|gb|FL178534.1|FL178534
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|116813412|gb|EC855863.1|EC855863
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211501444|gb|FL027591.1|FL027591
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|31364463|gb|CD448818.1|CD448818
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|211503790|gb|FL027609.1|FL027609
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|32910560|gb|CF015372.1|CF015372
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|19058880|gb|BM737547.1|BM737547
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|149096374|gb|EE182105.2|EE182105
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|6021327|gb|AW066255.1|AW066255
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
EST: gi|60357476|gb|DN224449.1|DN224449
EST:     GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGG                         ATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT
genomic: GTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGAT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 2460

CCCTTTCTCTAAGAAGGATTGGTATGACATCAAGGCACCGTCGGTGTTCAGTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGATCTTCAGGGCGACGAGGATCAAGCTTACAGGAAAATCAGGCTCCGTGCTG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1981

CCCTTTCTCTAAGAAGGATTGGTATGACATCAAGGCACCGTCGGTGTTCAGTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGATCTTCAGGGCGACGAGGATCAAGCTTACAGGAAAATCAGGCTCCGTGCTG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1969

CCCTTTCTCTAAGAAGGATTGGTATGACATCAAGGCACCGTCGGTGTTCAGTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGATCTTCAGGGCGACGAGGATCAAGCTTACAGGAAAATCAGGCTCCGTGCTG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1185

CCCTTTCTCTAAGAAGGATTGGTATGACATCAAGGCACCGTCGGTGTTCAGTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgttttt ... ctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGATCTTCAGGGCGACGAGGATCAAGCTTACAGGAAAATCAGGCTCCGTGCTG


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CCCTTTCTCTAAGAAGGATTGGTATGACATCAAGGCACCGTCGGTGTTCAGTGTGCGCAACATCGGGAAGACTCTCGTATCCAGGACACAGGGTACCAGGgtatgtttttttttgactatcgatattttttcgtactgcccctacattgtgtgttgtgaacttgcgcatatatgcatgtgtatgtagaccgcgctagtca

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