Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGATGCCCTCAAGGAGGGAATGGGAGGCGGTGGTGGGATGCATGATCCCTTTGACATATTCCAGTCATTCTTTGGTGGTGGAAGCCCTTTTGGAGGTATgttacaaaagaaaaagaaaaaaaagaactgatgcaatgccatttgatcaagaattgcctacatagtggctcaccctgtttgttcttgtgcaaaggtggcagcag

Basic information

species Zea mays
transcript GRMZM2G028218_T02
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G028218_T02 (Zea mays), 5'ss of exon 2
lower sequence: Vv06s0080g01230.t01 (Vitis vinifera), 5'ss of exon 2
-------AGGATGCCCTCAAGGAGGGAATGGGAGGCGGTGGTGGGATGCATGATCCCTTTGACATATTCCAGTCATTCTTTGGTGGTGGAAGCCCTTTTGGAGGTATgttacaaaagaaaaagaaaaaaaagaactgatgcaatgccatttgatcaagaattgcct----acatagtggctcaccctgtttgttcttgtgcaa----aggtggcagcag
       | |||||||||||||| |||||||| ||| |||||||    |||||||| |||||||| ||||| || |||||||||||    || || ||||| |||| | |  |  | |  |  | | | || |  || ||  ||    || || |   | ||  ||     |   |||     |  || | | |    |  ||    |  ||  |||||
TATGGTGAAGATGCCCTCAAGGAAGGAATGGGTGGCAGTGGTGGTGGCCATGATCCATTTGACATTTTCCAATCTTTCTTTGGTGG---GAGTCCATTTGGTGgtaagatttatga-actattatatataatatgtggtgtgattggcttggagctcaattttactcagagccctgtgaagagcaatgctagattgaattaaatcttatttgtgagcag

upper sequence: GRMZM2G028218_T02 (Zea mays), 5'ss of exon 2
lower sequence: Vv13s0073g00560.t01 (Vitis vinifera), 5'ss of exon 3
-------AGGATGCCCTCAAGGAGGGAATGGGAGGCGGTGGTGGGATGCATGATCCCTTTGACATATTCCAGTCATTCTTTGGTGGTGGAAGCCCTTTTGGAGGTATgttacaaaagaaaaaga-------aaaaaaagaactgatgcaatgccatttgatcaagaattgcctacatagtggctcaccctgtttgttcttgtgcaaaggtggcagcag
       | ||||| || || || |||||||| || || |||||    ||||| ||||||||||||||||| || |||||||||||    | ||| ||||| |||| |  ||   ||     |         |||  | | ||   || |  |    |||   |  ||||   || |  ||| | |   | | ||| ||                   
TACGGAGAAGATGCTCTGAAAGAAGGAATGGGTGGTGGCGGTGGCGGCCATGACCCCTTTGACATATTCCAATCCTTCTTTGGTGGC---AACCCATTTGGTGgtaagagacttgagtctttgttcattttgaaatcaaagcttgagctac-cggcatgagtgaacattgttaac-tgttggatgaaattttatgtgctcag----------------
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211091230|gb|FK991018.1|FK991018
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211091230|gb|FK991018.1|FK991018
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211091230|gb|FK991018.1|FK991018
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211091230|gb|FK991018.1|FK991018
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537695|gb|FK990959.1|FK990959
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537695|gb|FK990959.1|FK990959
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537695|gb|FK990959.1|FK990959
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537695|gb|FK990959.1|FK990959
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088788|gb|FK991014.1|FK991014
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088788|gb|FK991014.1|FK991014
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088788|gb|FK991014.1|FK991014
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088788|gb|FK991014.1|FK991014
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088782|gb|FK991008.1|FK991008
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088782|gb|FK991008.1|FK991008
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088782|gb|FK991008.1|FK991008
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088782|gb|FK991008.1|FK991008
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211534685|gb|FK990944.1|FK990944
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211534685|gb|FK990944.1|FK990944
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211534685|gb|FK990944.1|FK990944
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211534685|gb|FK990944.1|FK990944
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211091232|gb|FK991020.1|FK991020
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211091232|gb|FK991020.1|FK991020
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211091232|gb|FK991020.1|FK991020
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211091232|gb|FK991020.1|FK991020
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|28361755|gb|CB240111.1|CB240111
EST:     ATATTCCAGTCATTCTTTGGTGGTGGAAGCCCTTTTGGAGGTGGCAGCAG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: ATATTCCAGTCATTCTTTGGTGGTGGAAGCCCTTTTGGAGGT------ATgttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|28361546|gb|CB239902.1|CB239902
EST:     ATATTCCAGTCATTCTTTGGTGGTGGAAGCCCTTTTGGAGGTGGCAGCAG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: ATATTCCAGTCATTCTTTGGTGGTGGAAGCCCTTTTGGAGGT------ATgttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540713|gb|FK990978.1|FK990978
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540713|gb|FK990978.1|FK990978
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540713|gb|FK990978.1|FK990978
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540713|gb|FK990978.1|FK990978
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540711|gb|FK990976.1|FK990976
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540711|gb|FK990976.1|FK990976
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540711|gb|FK990976.1|FK990976
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540711|gb|FK990976.1|FK990976
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088791|gb|FK991017.1|FK991017
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088791|gb|FK991017.1|FK991017
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088791|gb|FK991017.1|FK991017
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088791|gb|FK991017.1|FK991017
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531688|gb|FK990935.1|FK990935
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531688|gb|FK990935.1|FK990935
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531688|gb|FK990935.1|FK990935
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531688|gb|FK990935.1|FK990935
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537705|gb|FK990969.1|FK990969
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537705|gb|FK990969.1|FK990969
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537705|gb|FK990969.1|FK990969
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537705|gb|FK990969.1|FK990969
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531686|gb|FK990933.1|FK990933
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531686|gb|FK990933.1|FK990933
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531686|gb|FK990933.1|FK990933
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531686|gb|FK990933.1|FK990933
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531692|gb|FK990939.1|FK990939
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531692|gb|FK990939.1|FK990939
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531692|gb|FK990939.1|FK990939
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531692|gb|FK990939.1|FK990939
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540719|gb|FK990984.1|FK990984
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540719|gb|FK990984.1|FK990984
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540719|gb|FK990984.1|FK990984
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540719|gb|FK990984.1|FK990984
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088784|gb|FK991010.1|FK991010
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088784|gb|FK991010.1|FK991010
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088784|gb|FK991010.1|FK991010
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088784|gb|FK991010.1|FK991010
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540722|gb|FK990987.1|FK990987
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540722|gb|FK990987.1|FK990987
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540722|gb|FK990987.1|FK990987
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540722|gb|FK990987.1|FK990987
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211086326|gb|FK990994.1|FK990994
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211086326|gb|FK990994.1|FK990994
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211086326|gb|FK990994.1|FK990994
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211086326|gb|FK990994.1|FK990994
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531694|gb|FK990941.1|FK990941
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531694|gb|FK990941.1|FK990941
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531694|gb|FK990941.1|FK990941
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531694|gb|FK990941.1|FK990941
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531684|gb|FK990931.1|FK990931
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531684|gb|FK990931.1|FK990931
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531684|gb|FK990931.1|FK990931
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531684|gb|FK990931.1|FK990931
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211086321|gb|FK990989.1|FK990989
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211086321|gb|FK990989.1|FK990989
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211086321|gb|FK990989.1|FK990989
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211086321|gb|FK990989.1|FK990989
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531691|gb|FK990938.1|FK990938
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531691|gb|FK990938.1|FK990938
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531691|gb|FK990938.1|FK990938
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531691|gb|FK990938.1|FK990938
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537706|gb|FK990970.1|FK990970
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537706|gb|FK990970.1|FK990970
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537706|gb|FK990970.1|FK990970
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537706|gb|FK990970.1|FK990970
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537697|gb|FK990961.1|FK990961
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537697|gb|FK990961.1|FK990961
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537697|gb|FK990961.1|FK990961
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537697|gb|FK990961.1|FK990961
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088790|gb|FK991016.1|FK991016
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAA
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAA
EST: gi|211088790|gb|FK991016.1|FK991016
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAA
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAA
EST: gi|211088790|gb|FK991016.1|FK991016
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAA
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAA
EST: gi|211088790|gb|FK991016.1|FK991016
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAA
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAA
EST: gi|211086327|gb|FK990995.1|FK990995
EST:     AG                         TAGGGGCAGAAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAA
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAA-GGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAA
EST: gi|211086327|gb|FK990995.1|FK990995
EST:     AG                         TAGGGGCAGAAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAA
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAA-GGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAA
EST: gi|211086327|gb|FK990995.1|FK990995
EST:     AG                         TAGGGGCAGAAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAA
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAA-GGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAA
EST: gi|211086327|gb|FK990995.1|FK990995
EST:     AG                         TAGGGGCAGAAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAA
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAA-GGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAA
EST: gi|211086330|gb|FK990998.1|FK990998
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211086330|gb|FK990998.1|FK990998
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211086330|gb|FK990998.1|FK990998
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211086330|gb|FK990998.1|FK990998
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088783|gb|FK991009.1|FK991009
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGA
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGA
EST: gi|211088783|gb|FK991009.1|FK991009
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGA
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGA
EST: gi|211088783|gb|FK991009.1|FK991009
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGA
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGA
EST: gi|211088783|gb|FK991009.1|FK991009
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGA
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGA
EST: gi|211537694|gb|FK990958.1|FK990958
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537694|gb|FK990958.1|FK990958
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537694|gb|FK990958.1|FK990958
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211537694|gb|FK990958.1|FK990958
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211534691|gb|FK990950.1|FK990950
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGNAGATGATGTGGTTCATCCTCTGAAG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGG-AGATGATGTGGTTCATCCTCTGAAG
EST: gi|211534691|gb|FK990950.1|FK990950
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGNAGATGATGTGGTTCATCCTCTGAAG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGG-AGATGATGTGGTTCATCCTCTGAAG
EST: gi|211534691|gb|FK990950.1|FK990950
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGNAGATGATGTGGTTCATCCTCTGAAG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGG-AGATGATGTGGTTCATCCTCTGAAG
EST: gi|211534691|gb|FK990950.1|FK990950
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGNAGATGATGTGGTTCATCCTCTGAAG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGG-AGATGATGTGGTTCATCCTCTGAAG
EST: gi|211088778|gb|FK991004.1|FK991004
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088778|gb|FK991004.1|FK991004
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088778|gb|FK991004.1|FK991004
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211088778|gb|FK991004.1|FK991004
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531689|gb|FK990936.1|FK990936
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531689|gb|FK990936.1|FK990936
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531689|gb|FK990936.1|FK990936
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211531689|gb|FK990936.1|FK990936
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211534686|gb|FK990945.1|FK990945
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211534686|gb|FK990945.1|FK990945
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211534686|gb|FK990945.1|FK990945
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211534686|gb|FK990945.1|FK990945
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|87155560|gb|DY400349.1|DY400349
EST:     AG                         TAGGGGCAGAAGGCAACGGCGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|87155560|gb|DY400349.1|DY400349
EST:     AG                         TAGGGGCAGAAGGCAACGGCGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|87155560|gb|DY400349.1|DY400349
EST:     AG                         TAGGGGCAGAAGGCAACGGCGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|87155560|gb|DY400349.1|DY400349
EST:     AG                         TAGGGGCAGAAGGCAACGGCGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540708|gb|FK990973.1|FK990973
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540708|gb|FK990973.1|FK990973
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540708|gb|FK990973.1|FK990973
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
EST: gi|211540708|gb|FK990973.1|FK990973
EST:     AG                         TAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG
genomic: --gttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 338

AGGATGCCCTCAAGGAGGGAATGGGAGGCGGTGGTGGGATGCATGATCCCTTTGACATATTCCAGTCATTCTTTGGTGGTGGAAGCCCTTTTGGAGGTATgttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGGTTTCTCTGGAGGATTTGTACAATGGCACATCAAAGAAGCTCTCTCTGTCC


Block sizes: 49 (upstream exon), 46 (downstream exon)
Score: 92

AGGATGCCCTCAAGGAGGGAATGGGAGGCGGTGGTGGGATGCATGATCCCTTTGACATATTCCAGTCATTCTTTGGTGGTGGAAGCCCTTTTGGAGGTATgttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGGTTTCTCTGGAGGATTTGTACAATGGCACATCAAAGAAGCTCTCTCTGTCC


Block sizes: 49 (upstream exon), 47 (downstream exon)
Score: 101

AGGATGCCCTCAAGGAGGGAATGGGAGGCGGTGGTGGGATGCATGATCCCTTTGACATATTCCAGTCATTCTTTGGTGGTGGAAGCCCTTTTGGAGGTATgttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGGTTTCTCTGGAGGATTTGTACAATGGCACATCAAAGAAGCTCTCTCTGTCC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 954

AGGATGCCCTCAAGGAGGGAATGGGAGGCGGTGGTGGGATGCATGATCCCTTTGACATATTCCAGTCATTCTTTGGTGGTGGAAGCCCTTTTGGAGGTATgttacaaaag ... gtggcagcagTAGGGGCAGAAGGCAACGACGGGGAGATGATGTGGTTCATCCTCTGAAGGTTTCTCTGGAGGATTTGTACAATGGCACATCAAAGAAGCTCTCTCTGTCC


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AGGATGCCCTCAAGGAGGGAATGGGAGGCGGTGGTGGGATGCATGATCCCTTTGACATATTCCAGTCATTCTTTGGTGGTGGAAGCCCTTTTGGAGGTATgttacaaaagaaaaagaaaaaaaagaactgatgcaatgccatttgatcaagaattgcctacatagtggctcaccctgtttgttcttgtgcaaaggtggcagcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAGG