1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CTGGAACATCGTCTACCAGTTCCGCAAGGCGCAGAGCGAGATCGACAATTACCTCCGCCTCGTCCCGCTCATCACGCTCGTCGACAATGCCCGCATTCGGgtcggtaatcggctttcatctctctcccttttctacccaagctgtttgtttacattcttctcacgcattcgggtaggctcctagactggatgtgggcctt...
species | Zea mays |
transcript | GRMZM2G027821_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ACCTCCGCCTCGTCCCGCTCATCACGCTCGTCGACAATGCCCGCATTCGG GATCGGCTTGAGTEST: gi|74235249|gb|DT643163.1|DT643163
genomic: ACCTCCGCCTCGTCCCGCTCATCACGCTCGTCGACAATGCCCGCATTCGGgtcggtaatc ... cttttcctagGATCGGCTTGAGT
EST: ACCTCCGCCTCGTCCCGCTCATCACGCTCGTCGACNATGCCCGCATTCGG GATCGGCTTGAGTATATTGAGAGGGAACAATGTGAATATTCCTTTGACGAGEST: gi|78079351|gb|DV507763.1|DV507763
genomic: ACCTCCGCCTCGTCCCGCTCATCACGCTCGTCGACAATGCCCGCATTCGGgtcggtaatc ... cttttcctagGATCGGCTTGAGTATATTGAGAGGGACCAATGTGAATATTCCTTTGACGAG
EST: ACCTCCGCCTCGTCCCGCTCATCACGCTCGTCGACAATGCCCGCATTCGG GATCGGCTTGAGTATATTGAGAGGGACCNATGTGA-TATT
genomic: ACCTCCGCCTCGTCCCGCTCATCACGCTCGTCGACAATGCCCGCATTCGGgtcggtaatc ... cttttcctagGATCGGCTTGAGTATATTGAGAGGGACCAATGTGAATATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGGAACATCGTCTACCAGTTCCGCAAGGCGCAGAGCGAGATCGACAATTACCTCCGCCTCGTCCCGCTCATCACGCTCGTCGACAATGCCCGCATTCGGgtcggtaatcggctttcatctctctcccttttctacccaagctgtttgtttacattcttctcacgcattcgggtaggctcctagactggatgtgggcctt
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