Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|91057155|gb|EB167573.1|EB167573EST: CTTGCTGGTAGAGGAAACCCCTAGGGTGAAGCCTAAGAAGCCAACTACAG GAAAGCCTTTGGGGCGTGGTCGCGGCCGAGGTCGTGGACGTGGTCGGGGCC
genomic: CTTGCTGGTAGAGGAAACCCCTAGGGTGAAGCCTAAGAAGCCAACTACAGgtttggtttc ... ttctgtgcagGAAAGCCTTTGGGGCGTGGTCGCGGCCGAGGTCGTGGACGTGGTCGGGGCC
EST:
gi|76293638|gb|DV033206.1|DV033206EST: CTTGCTGGTAGAGGAAACCCCTAGGGTGAAGCCTAAGAAGCCAACTACAG GAAAGCCTTTGGGGCGTGGTCGCGGCCGAGGTCGTGGACGTGGTCGGGGCC
genomic: CTTGCTGGTAGAGGAAACCCCTAGGGTGAAGCCTAAGAAGCCAACTACAGgtttggtttc ... ttctgtgcagGAAAGCCTTTGGGGCGTGGTCGCGGCCGAGGTCGTGGACGTGGTCGGGGCC
EST:
gi|29945138|gb|CB815488.1|CB815488EST: CTTGCTGGTAGAGGAAACCCCTAGGGTGAAGCCTAAGAAGCCAACTACAG GAAAGCCTTTGGGGCGTGGTCGCGGCCGAGGTCGTGGACGTGGTCGGGGCC
genomic: CTTGCTGGTAGAGGAAACCCCTAGGGTGAAGCCTAAGAAGCCAACTACAGgtttggtttc ... ttctgtgcagGAAAGCCTTTGGGGCGTGGTCGCGGCCGAGGTCGTGGACGTGGTCGGGGCC
EST:
gi|45847704|gb|CN071647.1|CN071647EST: CCTGCTGGTAGAGGAAACCCCTAGGGTGAAGCCTAAGAAGCCAACTACAG GAAAGCCCTTGGGGCGTGGTCGCGGCCGAGGTCGTGGACGTGGTCGGGGCC
genomic: CTTGCTGGTAGAGGAAACCCCTAGGGTGAAGCCTAAGAAGCCAACTACAGgtttggtttc ... ttctgtgcagGAAAGCCTTTGGGGCGTGGTCGCGGCCGAGGTCGTGGACGTGGTCGGGGCC
EST:
gi|71445025|gb|DR826075.1|DR826075EST: CTTGCTGGTAGAGGAAACCCCTAGGGTGAAGCCTAAGAAGCCAACTACAG GAAAGCCTTTGGGGCGTGGTCGCGGCCGAGGTCGTGGACGTGGTCGGGGCC
genomic: CTTGCTGGTAGAGGAAACCCCTAGGGTGAAGCCTAAGAAGCCAACTACAGgtttggtttc ... ttctgtgcagGAAAGCCTTTGGGGCGTGGTCGCGGCCGAGGTCGTGGACGTGGTCGGGGCC
EST:
gi|88749844|gb|DY533985.1|DY533985EST: CTTGCTGGTAGAGGAAACCCCTAGGGTGAAGCCTAAGAAGCCAACTACAG GAAAGCCTTTGGGGCGTGGTCGCGGCCGAGGTCGTGGACGTGGTCGGGGCC
genomic: CTTGCTGGTAGAGGAAACCCCTAGGGTGAAGCCTAAGAAGCCAACTACAGgtttggtttc ... ttctgtgcagGAAAGCCTTTGGGGCGTGGTCGCGGCCGAGGTCGTGGACGTGGTCGGGGCC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GGAAACAACATCCGCTACTACATCCTTCCCGACAGCTTAAACCTGGAAACCTTGCTGGTAGAGGAAACCCCTAGGGTGAAGCCTAAGAAGCCAACTACAGgtttggtttcgcctgcctttgttctgatcgagtctaattgttgctaatgataccgactcactggccaacgtctgttctgtgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC