Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCGGCTACTACCTCAGGAAGAAGGTGGCCGCCCAGAAGATCGACCTCCACGTCATACGCGACATCGACCTCTACCGCATCGAGCCATGGGATCTCCAAGgtacgctagctagccgcagctccggccagcctgttccgatccggcctgtcgatctgaactgctggcgatgatcttaaatttcctgctctggctggctctgctctcaatctctcaag

Basic information

species Zea mays
transcript GRMZM2G025642_T02
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G025642_T02 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os03g03540.1 (Oryza sativa), 5'ss of exon 1
GTCGGCTACTACCTCAGGAAGAAGGTGGCCGCCCAGAAGATCGACCTCCACGTCATACGCGACATCGACCTCTACCGCATCGAGCCATGGGATCTCCAAGgtacgctagctagccgcagctccggccagcctgttccgatccggcctgtcgatctgaactgctggcgatgatcttaaatttcctgctctggctggctctgctctcaatctctcaag
||||||||||||||| | |||||||| ||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||||| || |||||||||||||||||   | ||||    || ||      |  || |   ||  |   |     || ||  || |     ||   |||  | ||||  |   | || ||    | |  ||   | |||
GTCGGCTACTACCTCCGCAAGAAGGTCGCCTCCCAGAAGATCGACCTCGACGTCATCCGCGACATCGATCTCTACCGCATCGAACCCTGGGATCTCCAAGgtac---aactag----agatc------gtatgatt-aatttgagtt-----tcagagatgatcattgtggcattatttatcctaattgtgttgcctggtttgttgattgatgaag