1 5' 3' | 2 5' 3' | 3 5' 3' |
GGTTCCCTCCCTTCCCGAGCGTCATGGACATCAACCAGATCCGCGAGATCCTCCCCCACAGgtgagtgccggaagcttgattcctcgtccttggggttgctcaaacatgtttggcattgcaatcccacgacacaactcaggttgatgcaacagcttgaaaa...
species | Zea mays |
transcript | GRMZM2G024482_T02 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TTCCCGAGCGTCATGGACATCAACCAGATCCGCGAGATCCTCCCCCACAG GTTCCCATTCCTTTTGGTTGATAGAGTAATTGAATACAAGGCTGGAGAATAEST: gi|211091572|gb|FL457274.1|FL457274
genomic: TTCCCGAGCGTCATGGACATCAACCAGATCCGCGAGATCCTCCCCCACAGgtgagtgccg ... tgcatgttagGTTCCCATTCCTTTTGGTTGATAGAGTAATTGAATACAAGGCTGGAGAATA
EST: TCCCCGAGCGTCATGGACATCAACCAGATCCGCGAGATCCTCCCCCACAG GTTCCCATTCCTTTTGGTTGATAGAGTAATTAAATACAAGGCTGGAGAATAEST: gi|60345198|gb|DN212171.1|DN212171
genomic: T-CCCGAGCGTCATGGACATCAACCAGATCCGCGAGATCCTCCCCCACAGgtgagtgccg ... tgcatgttagGTTCCCATTCCTTTTGGTTGATAGAGTAATTGAATACAAGGCTGGAGAATA
EST: TTCCCGAGCGTCATGGACATCAACCAGATCCGCGAGATCCTCCCCCACAG GTTCCCATTCCTTTTGGTTGATAGAGTAATTGAATACAAGGCTGGAGAATAEST: gi|40334305|gb|CK368375.1|CK368375
genomic: TTCCCGAGCGTCATGGACATCAACCAGATCCGCGAGATCCTCCCCCACAGgtgagtgccg ... tgcatgttagGTTCCCATTCCTTTTGGTTGATAGAGTAATTGAATACAAGGCTGGAGAATA
EST: TTCCCGAGCGTCATGGACATCAACCAGATCCGCGAGATCCTCCCCCACAG GTTCCCATTCCTTTTGGTTGATAGAGTAATTGAATACAAGGCTGGAGAATAEST: gi|37377757|gb|CF625513.1|CF625513
genomic: TTCCCGAGCGTCATGGACATCAACCAGATCCGCGAGATCCTCCCCCACAGgtgagtgccg ... tgcatgttagGTTCCCATTCCTTTTGGTTGATAGAGTAATTGAATACAAGGCTGGAGAATA
EST: CCCGAGCGTCATGGACATCAACCAGTATCCGCGAGATCCTCCCCCCACAG GTTCCCATTCCTTTTGGTTGATAGAGTAATTGAATACAAGGCTGGAGAATEST: gi|211283730|gb|FL464726.1|FL464726
genomic: CCCGAGCGTCATGGACATCAACCAG-ATCCGCGAGATCCT-CCCCCACAGgtgagtgccg ... tgcatgttagGTTCCCATTCCTTTTGGTTGATAGAGTAATTGAATACAAGGCTGGAGAAT
EST: TTCCCGAGCGTCATGGACATCAACCAGATCCGCGAGATCCTCCCCCACAG GTTCCCATTCCTTTTGGTTGATAGAGTAATTGAATACAAGGCTGGAGAATA
genomic: TTCCCGAGCGTCATGGACATCAACCAGATCCGCGAGATCCTCCCCCACAGgtgagtgccg ... tgcatgttagGTTCCCATTCCTTTTGGTTGATAGAGTAATTGAATACAAGGCTGGAGAATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTTCCCTCCCTTCCCGAGCGTCATGGACATCAACCAGATCCGCGAGATCCTCCCCCACAGgtgagtgccggaagcttgattcctcgtccttggggttgctcaaacatgtttggcattgcaatcccacgacacaactcaggttgatgcaacagcttgaaaa
- - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cctcgtcc