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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACAAGGTGTGCTCGTGGATCGCAATCATCTTCTGCGCTCAGTCGTTGGCAAACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttcttaacagacttgaggtttatgcattgaactttgagtgtggcttaaaaaagcacagttaaaatctagagactatcttagcaacatatgctt...

Basic information

species Zea mays
transcript GRMZM2G023833_T01
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G023833_T01 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os03g54980.1 (Oryza sativa), 5'ss of exon 2
ACAAGGTGTGCTCGTGGATCGCAATCATCTTCTGCGCTCAGTCGTTGGCAAACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttcttaacagacttgaggtttatgcattgaactttgagtgtggcttaaaaaagcacagttaaaatctagagactatcttagcaacatatgctt---
|||||||||||||||||||||| |||||||||||||| |||||  |||  ||||||||||| || ||||| ||||| |||||| | || ||||| ||||||||||||  ||| ||  | ||    |||||||||||       | |  |   ||  |   |  | || ||||||||||        ||||||||||||||   
ACAAGGTGTGCTCGTGGATCGCTATCATCTTCTGCGCGCAGTCTCTGGTGAACATGAAGAATTTCGAGAATGATCTCAAGCAGTTATCCATGGCTTTCATgtgagttcccttcacgtatttac--tttatgcattgtttaaccactaggaaatactact-cgaatttcaaatctagaggaacatgcagcaacatatgctttgg
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211270209|gb|FL227998.1|FL227998
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211394183|gb|FL455067.1|FL455067
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|18180983|gb|BM382193.1|BM382193
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211258020|gb|FL227923.1|FL227923
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAN                         NNNNNNTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211258023|gb|FL227926.1|FL227926
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211265334|gb|FL227966.1|FL227966
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|18178352|gb|BM379562.1|BM379562
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211255575|gb|FL227907.1|FL227907
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211260453|gb|FL227935.1|FL227935
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211260459|gb|FL227941.1|FL227941
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|28910393|gb|CB331416.1|CB331416
EST:     ACCATGAAGATCTTTGAGAACGATCTGAAGCAGCTTTTTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|18178825|gb|BM380035.1|BM380035
EST:     AACATGAAGAACTTTGAGAACGATTTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|28983343|gb|BQ538617.2|BQ538617
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211262889|gb|FL227946.1|FL227946
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211270210|gb|FL227999.1|FL227999
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTG-CTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAG
EST: gi|211191450|gb|FL473724.1|FL473724
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|18181595|gb|BM382805.1|BM382805
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211255574|gb|FL227906.1|FL227906
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGNCTTCAT                         GTTTGCTGTTATGGGTC
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTC
EST: gi|211265325|gb|FL227957.1|FL227957
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211258010|gb|FL227913.1|FL227913
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211265329|gb|FL227961.1|FL227961
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211270198|gb|FL227987.1|FL227987
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211258019|gb|FL227922.1|FL227922
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCGGGTGCCAAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211270202|gb|FL227991.1|FL227991
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACNAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211258017|gb|FL227920.1|FL227920
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211265337|gb|FL227969.1|FL227969
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211267759|gb|FL227974.1|FL227974
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211267763|gb|FL227978.1|FL227978
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211260448|gb|FL227930.1|FL227930
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211270207|gb|FL227996.1|FL227996
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211394184|gb|FL455068.1|FL455068
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|18164035|gb|BM333874.1|BM333874
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211267768|gb|FL227983.1|FL227983
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|15082772|gb|BI389456.1|BI389456
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211378335|gb|FL228011.1|FL228011
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211258018|gb|FL227921.1|FL227921
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|120480710|gb|EH210973.1|EH210973
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGATGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|28910395|gb|CB331417.1|CB331417
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211255567|gb|FL227899.1|FL227899
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211260455|gb|FL227937.1|FL227937
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|14245424|gb|BG874006.1|BG874006
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211255577|gb|FL227909.1|FL227909
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACCAACTAYTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211258021|gb|FL227924.1|FL227924
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211270201|gb|FL227990.1|FL227990
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211267757|gb|FL227972.1|FL227972
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|60341564|gb|DN208537.1|DN208537
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|26557746|gb|CA829981.1|CA829981
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|166676167|gb|EG138603.1|EG138603
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGGGACG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACG
EST: gi|149083098|gb|EE172359.2|EE172359
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211258009|gb|FL227912.1|FL227912
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCACCCCCCGCTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|47962683|gb|CN845392.1|CN845392
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211265330|gb|FL227962.1|FL227962
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211378329|gb|FL228005.1|FL228005
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211378328|gb|FL228004.1|FL228004
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211255571|gb|FL227903.1|FL227903
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211270199|gb|FL227988.1|FL227988
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211262890|gb|FL227947.1|FL227947
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211270208|gb|FL227997.1|FL227997
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAANTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211270205|gb|FL227994.1|FL227994
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211260452|gb|FL227934.1|FL227934
EST:     AACATSAAGAACTTTGAGARCGATCTGAAGCAGCTTTCYATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTRACKAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211265335|gb|FL227967.1|FL227967
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|45847829|gb|CN071772.1|CN071772
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCACCGCTAGAACAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211378331|gb|FL228007.1|FL228007
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211255566|gb|FL227898.1|FL227898
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211378337|gb|FL228013.1|FL228013
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211267762|gb|FL227977.1|FL227977
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211262892|gb|FL227949.1|FL227949
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211262899|gb|FL227956.1|FL227956
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|116817629|gb|EC860504.1|EC860504
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACT
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACT
EST: gi|211265328|gb|FL227960.1|FL227960
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211267761|gb|FL227976.1|FL227976
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGG
EST: gi|211260445|gb|FL227927.1|FL227927
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211260454|gb|FL227936.1|FL227936
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211262891|gb|FL227948.1|FL227948
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211255570|gb|FL227902.1|FL227902
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|15208835|gb|BI430719.1|BI430719
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211260458|gb|FL227940.1|FL227940
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211262896|gb|FL227953.1|FL227953
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211267769|gb|FL227984.1|FL227984
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211267758|gb|FL227973.1|FL227973
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211267771|gb|FL227986.1|FL227986
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCMGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211255576|gb|FL227908.1|FL227908
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|78123320|gb|DV541704.1|DV541704
EST:     AACATGAAGAACTTTGAGAACGATTTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211260451|gb|FL227933.1|FL227933
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211270200|gb|FL227989.1|FL227989
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211255565|gb|FL227897.1|FL227897
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211255573|gb|FL227905.1|FL227905
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|14243409|gb|BG841119.2|BG841119
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211269759|gb|FL091747.1|FL091747
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211378332|gb|FL228008.1|FL228008
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211262888|gb|FL227945.1|FL227945
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211262893|gb|FL227950.1|FL227950
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211378330|gb|FL228006.1|FL228006
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|33942563|gb|CF349163.1|CF349163
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211258011|gb|FL227914.1|FL227914
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGGTTATGGGGTCTGGTGACGAAACTATTTTGGCCCCGCTCGGTC
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTG-TTATGGG-TCTGGTGACGAA-CTATTTTGGCCCCGCTCG-TC
EST: gi|211265332|gb|FL227964.1|FL227964
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211258022|gb|FL227925.1|FL227925
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211260447|gb|FL227929.1|FL227929
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGA
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGA
EST: gi|211270204|gb|FL227993.1|FL227993
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211086072|gb|FL433939.1|FL433939
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211267770|gb|FL227985.1|FL227985
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTNTGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211378334|gb|FL228010.1|FL228010
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACG
EST: gi|211265336|gb|FL227968.1|FL227968
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211260450|gb|FL227932.1|FL227932
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211260456|gb|FL227938.1|FL227938
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG
EST: gi|211265327|gb|FL227959.1|FL227959
EST:     AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCAT                         GTTTGCTGTTATGGGTCTGGTGACGAACGATTTTGGCCCCGCTCGTCCAGG
genomic: AACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 554

ACAAGGTGTGCTCGTGGATCGCAATCATCTTCTGCGCTCAGTCGTTGGCAAACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGGCAGTACAAAGCGCTAAACTGCGGAAGAACATGTGCTACATTCTTCATAG


Block sizes: 46 (upstream exon), 49 (downstream exon)
Score: 631

ACAAGGTGTGCTCGTGGATCGCAATCATCTTCTGCGCTCAGTCGTTGGCAAACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGGCAGTACAAAGCGCTAAACTGCGGAAGAACATGTGCTACATTCTTCATAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 749

ACAAGGTGTGCTCGTGGATCGCAATCATCTTCTGCGCTCAGTCGTTGGCAAACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGGCAGTACAAAGCGCTAAACTGCGGAAGAACATGTGCTACATTCTTCATAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 578

ACAAGGTGTGCTCGTGGATCGCAATCATCTTCTGCGCTCAGTCGTTGGCAAACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttc ... acatttccagGTTTGCTGTTATGGGTCTGGTGACGAACTATTTTGGCCCCGCTCGTCCAGGCAGTACAAAGCGCTAAACTGCGGAAGAACATGTGCTACATTCTTCATAG


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ACAAGGTGTGCTCGTGGATCGCAATCATCTTCTGCGCTCAGTCGTTGGCAAACATGAAGAACTTTGAGAACGATCTGAAGCAGCTTTCTATGGCCTTCATgtgagttttcttaacagacttgaggtttatgcattgaactttgagtgtggcttaaaaaagcacagttaaaatctagagactatcttagcaacatatgctt

- - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - taaaaaag