Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccacgcttctctttgtctcactgtggatgcgtggtgctttctctgttgaacatatgattatctaacgttatgcactcgttgagttcactaagag...

Basic information

species Zea mays
transcript GRMZM2G023748_T02
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|29130708|gb|CB381412.1|CB381412
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211423212|gb|FL142531.1|FL142531
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211428426|gb|FL142567.1|FL142567
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|40335029|gb|CK369099.1|CK369099
EST:     ATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: ATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|28873914|gb|CB329841.1|CB329841
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32908493|gb|CF013306.1|CF013306
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211423215|gb|FL142534.1|FL142534
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211431013|gb|FL142572.1|FL142572
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|120480732|gb|EH210979.1|EH210979
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCGCCATGAG                         TAAGCTGCAGGGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211423213|gb|FL142532.1|FL142532
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211431015|gb|FL142574.1|FL142574
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|21390066|gb|BQ528115.1|BQ528115
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|33094079|gb|CF054073.1|CF054073
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|33092182|gb|CF052176.1|CF052176
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|33091080|gb|CF051074.1|CF051074
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211425823|gb|FL142546.1|FL142546
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32864961|gb|CF004643.1|CF004643
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211428425|gb|FL142566.1|FL142566
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211423210|gb|FL142529.1|FL142529
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211423218|gb|FL142537.1|FL142537
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|33102854|gb|CF062814.1|CF062814
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32927852|gb|CF032664.1|CF032664
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211425816|gb|FL142539.1|FL142539
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|31910120|gb|CD651265.1|CD651265
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32907871|gb|CF012684.1|CF012684
EST:     GAACGCTGTTCGCAATTCCGGCGCCGACACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|91874847|gb|EB404804.1|EB404804
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211431017|gb|FL142576.1|FL142576
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211431012|gb|FL142571.1|FL142571
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|33095033|gb|CF055027.1|CF055027
EST:     CGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: CGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|71431480|gb|DR812530.1|DR812530
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32866057|gb|CF005739.1|CF005739
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCATTGT
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|33092582|gb|CF052576.1|CF052576
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211423217|gb|FL142536.1|FL142536
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|33092973|gb|CF052967.1|CF052967
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211431009|gb|FL142568.1|FL142568
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32864276|gb|CF003958.1|CF003958
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211425829|gb|FL142552.1|FL142552
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|61118288|gb|DN559249.1|DN559249
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211428414|gb|FL142555.1|FL142555
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|71427093|gb|DR808143.1|DR808143
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTACCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211428422|gb|FL142563.1|FL142563
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32944998|gb|CF049817.1|CF049817
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32944968|gb|CF049787.1|CF049787
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211428416|gb|FL142557.1|FL142557
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|33095013|gb|CF055007.1|CF055007
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32909384|gb|CF014196.1|CF014196
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|31557946|gb|CD527158.1|CD527158
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32906844|gb|CF011657.1|CF011657
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCATTTATCCAATG
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTA-CCAATG
EST: gi|32864379|gb|CF004061.1|CF004061
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32165025|gb|CD670343.1|CD670343
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAG-GATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32942884|gb|CF047703.1|CF047703
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211425822|gb|FL142545.1|FL142545
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|33103026|gb|CF062986.1|CF062986
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32927257|gb|CF032069.1|CF032069
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211423211|gb|FL142530.1|FL142530
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211428417|gb|FL142558.1|FL142558
EST:     GAACGCTGTTCGCAANTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCNCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|5325123|gb|AI783314.1|AI783314
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32908830|gb|CF013643.1|CF013643
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|33101936|gb|CF061896.1|CF061896
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32906792|gb|CF011605.1|CF011605
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211428415|gb|FL142556.1|FL142556
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211425826|gb|FL142549.1|FL142549
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211428413|gb|FL142554.1|FL142554
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211423209|gb|FL142528.1|FL142528
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32908661|gb|CF013474.1|CF013474
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211425821|gb|FL142544.1|FL142544
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211431010|gb|FL142569.1|FL142569
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|33094646|gb|CF054640.1|CF054640
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|33091485|gb|CF051479.1|CF051479
EST:     GAACGCTGTTCACAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211431011|gb|FL142570.1|FL142570
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211428418|gb|FL142559.1|FL142559
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|60338291|gb|DN205264.1|DN205264
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211428421|gb|FL142562.1|FL142562
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32862578|gb|CF002260.1|CF002260
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|6536547|gb|AW224860.1|AW224860
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211428424|gb|FL142565.1|FL142565
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32907040|gb|CF011853.1|CF011853
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTAAATTACCTATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211425824|gb|FL142547.1|FL142547
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211423208|gb|FL142527.1|FL142527
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211431018|gb|FL142577.1|FL142577
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211425828|gb|FL142551.1|FL142551
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211425817|gb|FL142540.1|FL142540
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32858369|gb|CD998050.1|CD998050
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211425815|gb|FL142538.1|FL142538
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32906812|gb|CF011625.1|CF011625
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|33467525|gb|CF244574.1|CF244574
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|78106842|gb|DV525260.1|DV525260
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211428423|gb|FL142564.1|FL142564
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|211431016|gb|FL142575.1|FL142575
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32908735|gb|CF013548.1|CF013548
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32911274|gb|CF016086.1|CF016086
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGTGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
EST: gi|32927915|gb|CF032727.1|CF032727
EST:     GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAG                         TAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA
genomic: GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccac ... tctgtttcagTAAGCTGCAGAGTGATTCTCTGAGGGACGCGATTGCCTCAATTACCAATGA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GAACGCTGTTCGCAATTCCGGCGCCGGCACCATGAGgtaccgccacgcttctctttgtctcactgtggatgcgtggtgctttctctgttgaacatatgattatctaacgttatgcactcgttgagttcactaagag

- - GCTGTT