1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CTCGGCGAGCACTTCCCGGCGCCGGTCTACTTCTCCCTCCTCCCCATCATCGGCGGATGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTGgtgagtgacattgaaatcgccagttcctgaatcatatctcggagatacttatgctgatgacacatgagaaatatcccagagatagttttcacgccggttt...
species | Zea mays |
transcript | GRMZM2G009223_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CGGCGGATGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTG GATTCATGGGGGCAATGATCTCGAACCTGGCATTCGTCGTCCGGACCATCTEST: gi|78105232|gb|DV523650.1|DV523650
genomic: CGGCGGATGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTGgtgagtgaca ... cccaccgcagGATTCATGGGGGCAATGATCTCCAACCTGGCATTCGTCGTCCGGACCATCT
EST: CGGCGGATGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTG GATTCATGGGGGCAATGATCTCCAACCTGGCATTCGTCGTCCGGACCATCTEST: gi|78092781|gb|DV521155.1|DV521155
genomic: CGGCGGATGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTGgtgagtgaca ... cccaccgcagGATTCATGGGGGCAATGATCTCCAACCTGGCATTCGTCGTCCGGACCATCT
EST: CGGCGGATGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTG GATTCATGGGGGCAATGATCTCCAACCTGGCATTCGTCGTCCGGACCATCTEST: gi|22521530|gb|BU080341.1|BU080341
genomic: CGGCGGATGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTGgtgagtgaca ... cccaccgcagGATTCATGGGGGCAATGATCTCCAACCTGGCATTCGTCGTCCGGACCATCT
EST: CGGCGGATGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTG GATTCATGGGGGCAATGATCTCCAACCTGGCATTCGTCGTCCGGACCATCT
genomic: CGGCGGATGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTGgtgagtgaca ... cccaccgcagGATTCATGGGGGCAATGATCTCCAACCTGGCATTCGTCGTCCGGACCATCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCGGCGAGCACTTCCCGGCGCCGGTCTACTTCTCCCTCCTCCCCATCATCGGCGGATGCGCGCTCGCCGCCGTCACCGAGCTCAACTTCAACATGGTTGgtgagtgacattgaaatcgccagttcctgaatcatatctcggagatacttatgctgatgacacatgagaaatatcccagagatagttttcacgccggttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gagaaata