1 5' 3' | 2 5' 3' | 3 5' 3' |
AAAAACTCAAAAAGAGAAAAAGAAAGGAAGCAAGCGTCAGCAAAATGGAGGACCTCTTGTCCCTGAAATTGATGATTTTGATGAAGATGAACTAAAAGAGgtgctattctttttcttcatcctctttatttgtattagaatattcatgatgaactgtatctctttcctgatagtttcgtcattatttaattagaccccac...
species | Zea mays |
transcript | AC203535.4_FGT001 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GACCTCTTGTCCCTGAAATTGATGATTTTGATGAAGATGAACTAAAAGAG GCTAGCTCTATGGTTGAAGAGGAGATTCAATACCTTCGAGTGGCCATGGGTEST: gi|32934502|gb|CF039314.1|CF039314
genomic: GACCTCTTGTCCCTGAAATTGATGATTTTGATGAAGATGAACTAAAAGAGgtgctattct ... gaattggcagGCTAGCTCTATGGTTGAAGAGGAGATTCAATACCTTCGAGTGGCCATGGGT
EST: GTCCCTGAAATTGATGATTTTGATGAAGATGAACTAAAAGAG GCTAGCTCTATGGTTGAAGAGGAGATTCAATACCTTCGAGTGGCCATGGGTEST: gi|32931520|gb|CF036332.1|CF036332
genomic: GTCCCTGAAATTGATGATTTTGATGAAGATGAACTAAAAGAGgtgctattct ... gaattggcagGCTAGCTCTATGGTTGAAGAGGAGATTCAATACCTTCGAGTGGCCATGGGT
EST: GAAATTGATGATTTTGATGAAGATGAACTAAAAGAG GCTAGCTCTATGGTTGAAGAGGAGATTCAATACCTTCGAGTGGCCATGGGT
genomic: GAAATTGATGATTTTGATGAAGATGAACTAAAAGAGgtgctattct ... gaattggcagGCTAGCTCTATGGTTGAAGAGGAGATTCAATACCTTCGAGTGGCCATGGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAAACTCAAAAAGAGAAAAAGAAAGGAAGCAAGCGTCAGCAAAATGGAGGACCTCTTGTCCCTGAAATTGATGATTTTGATGAAGATGAACTAAAAGAGgtgctattctttttcttcatcctctttatttgtattagaatattcatgatgaactgtatctctttcctgatagtttcgtcattatttaattagaccccac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG