1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' |
TGATTTATCCTATAATCATCTTGGTGGTCTGATTCCTCAAGAACTTGGAATGCTGCAAAACCTGATGTTGCTgtaagttatatcaaagttctttagtctgtaagtttaatttctgaactgcagctttgttctgaatcatcatttactcttgtag
species | Zea mays |
transcript | GRMZM5G809695_T03 |
intron # | 19 |
splice site | 5' |
intron type | U2 |
EST: GGTGGTCTGATTCCTCAAGAACTTGGAATGCTGCAAAACCTGATGTTGCT AAAACTGGAAAACAACAATATAACTGGCGATGTCTCTTCTCTGATGAACTGEST: gi|211021287|gb|FL334113.1|FL334113
genomic: GGTGGTCTGATTCCTCAAGAACTTGGAATGCTGCAAAACCTGATGTTGCTgtaagttata ... actcttgtagAAAACTGGAAAACAACAATATAACTGGCGATGTCTCTTCTCTGATGAACTG
EST: GGTGGTCTGATTCCTCAAGAACTTGGAATGCTGCAAAACCTGATGTTGCT AAAACTGGAAAACAACAATATAACTGGCGATGTCTCTTCTCTGATGAACTGEST: gi|211538240|gb|FL353975.1|FL353975
genomic: GGTGGTCTGATTCCTCAAGAACTTGGAATGCTGCAAAACCTGATGTTGCTgtaagttata ... actcttgtagAAAACTGGAAAACAACAATATAACTGGCGATGTCTCTTCTCTGATGAACTG
EST: GGTGGTCTGATTCCTCAAGAACTTGGAATGCTGCAAAACCTGATGTTGCT AAAACTGGAAAACAACAATATAACTGGCGATGTCTCTTCTCTGATGAACTGEST: gi|31405872|gb|CD484604.1|CD484604
genomic: GGTGGTCTGATTCCTCAAGAACTTGGAATGCTGCAAAACCTGATGTTGCTgtaagttata ... actcttgtagAAAACTGGAAAACAACAATATAACTGGCGATGTCTCTTCTCTGATGAACTG
EST: GGTGGTCTGATTCCTCAAGAACTTGGAATGCTGCAAAACCTGATGTTGCT AAAACTGGAAAACAACAATATAACTGGCGATGTCTCTTCTCTGATGAACTGEST: gi|211505743|gb|FL354866.1|FL354866
genomic: GGTGGTCTGATTCCTCAAGAACTTGGAATGCTGCAAAACCTGATGTTGCTgtaagttata ... actcttgtagAAAACTGGAAAACAACAATATAACTGGCGATGTCTCTTCTCTGATGAACTG
EST: GGTGGTCTGATTCCTCAAGAACTTGGAATGCTGCAAAACCTGATGTTGCT AAAACTGGAAAACAACAATATAAEST: gi|32164946|gb|CD670264.1|CD670264
genomic: GGTGGTCTGATTCCTCAAGAACTTGGAATGCTGCAAAACCTGATGTTGCTgtaagttata ... actcttgtagAAAACTGGAAAACAACAATATAA
EST: GGTGGTCTGATTCCTCAAGAACTTGGAATGCTGCAAAACCTGATGTTGCT AAAACTGGAAAACAACAATATAACTGGCGATGTCTCTTCTCTGATGAACTG
genomic: GGTGGTCTGATTCCTCAAGAACTTGGAATGCTGCAAAACCTGATGTTGCTgtaagttata ... actcttgtagAAAACTGGAAAACAACAATATAACTGGCGATGTCTCTTCTCTGATGAACTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGATTTATCCTATAATCATCTTGGTGGTCTGATTCCTCAAGAACTTGGAATGCTGCAAAACCTGATGTTGCTgtaagttatatcaaagttctttagtctgtaagtttaatttctgaactgcagctttgttctgaatcatcatttactcttgtag
- - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC