1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' |
ACAAGAGGATGAAACAGCTTCATCTAACAGTTCAAAATCTGGCAAGAAACAACATGCAAGACCAGTTGATCTGGATCCACATGGTGAAAAATTAATCCAGgtatgtgcactgcatggccttgtatttttgtgtggtatttatcagttttttgtactcacaggttgcaagttatctgtggtagctagaagttctaccttggtttatgtttttttttttttgcag
species | Zea mays |
transcript | GRMZM2G047093_T01 |
intron # | 19 |
splice site | 5' |
intron type | U2 |
EST: AACATGCAAGACCAGTTGATCTGGATCCACATGGTGAAAAATTAATCCAG ATTGAAGACCCGCTTGCAGAAGCCACAAAATACTTGAAGCTTCTGCAGAATEST: gi|60340635|gb|DN207608.1|DN207608
genomic: AACATGCAAGACCAGTTGATCTGGATCCACATGGTGAAAAATTAATCCAGgtatgtgcac ... ttttttgcagATTGAAGACCCGCTTGCAGAAGCCACAAAATACTTGAAGCTTCTGCAGAAT
EST: AACATGCAAGACCAGTTGATCTGGATCCACATGGTGAAAAATTAATCCAG ATTGAAGACCCGCTTGCAGAAGCCACAAAATACTTGAAGCTTCTGCAGAATEST: gi|31355959|gb|CD440316.1|CD440316
genomic: AACATGCAAGACCAGTTGATCTGGATCCACATGGTGAAAAATTAATCCAGgtatgtgcac ... ttttttgcagATTGAAGACCCGCTTGCAGAAGCCACAAAATACTTGAAGCTTCTGCAGAAT
EST: AACATGCAAGACCAGTTGATCTGGATCCACATGGTGAAAAATTAATCCAG ATTGAAGACCCGCTTGCAGAAGCCACAAAATACTTGAAGCTTCTGCAGAATEST: gi|211305930|gb|FL095824.1|FL095824
genomic: AACATGCAAGACCAGTTGATCTGGATCCACATGGTGAAAAATTAATCCAGgtatgtgcac ... ttttttgcagATTGAAGACCCGCTTGCAGAAGCCACAAAATACTTGAAGCTTCTGCAGAAT
EST: AACATGCAAGACCAGTTGATCTGGATCCACATGGTGAAAAATTAATCCAG ATTGAAGACCCGCTTGCAGAAGCCACAAAATACTTGNAGCTTCTGCAGAATEST: gi|67014809|gb|CO443558.1|CO443558
genomic: AACATGCAAGACCAGTTGATCTGGATCCACATGGTGAAAAATTAATCCAGgtatgtgcac ... ttttttgcagATTGAAGACCCGCTTGCAGAAGCCACAAAATACTTGAAGCTTCTGCAGAAT
EST: ACATGCAAGACCAGTTGATCTGGATCCACATGGTNGAAAAATTAATCCAG ATTGAAGACCCGCTTGCAGAAGCCACAAAATACTTGAAGCTTCTGCAGAATEST: gi|211305932|gb|FL095826.1|FL095826
genomic: ACATGCAAGACCAGTTGATCTGGATCCACATGGT-GAAAAATTAATCCAGgtatgtgcac ... ttttttgcagATTGAAGACCCGCTTGCAGAAGCCACAAAATACTTGAAGCTTCTGCAGAAT
EST: AACATGCAAGACCAGTTGATCTGGATCCACATGGTGAAAAATTAATCCAG ATTGAAGACCCGCTTGCAGAAGCCACAAAATACTTGAAGCTTCTGCAGAATEST: gi|60349287|gb|DN216260.1|DN216260
genomic: AACATGCAAGACCAGTTGATCTGGATCCACATGGTGAAAAATTAATCCAGgtatgtgcac ... ttttttgcagATTGAAGACCCGCTTGCAGAAGCCACAAAATACTTGAAGCTTCTGCAGAAT
EST: AACATGCAAGACCAGTTGATCTGGATCCACATGGTGAAAAATTAATCCAG ATTGAAGACCCGCTTGCAGAAGCCACAAAATACTTGAAGCTTCTGCAGAAT
genomic: AACATGCAAGACCAGTTGATCTGGATCCACATGGTGAAAAATTAATCCAGgtatgtgcac ... ttttttgcagATTGAAGACCCGCTTGCAGAAGCCACAAAATACTTGAAGCTTCTGCAGAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAAGAGGATGAAACAGCTTCATCTAACAGTTCAAAATCTGGCAAGAAACAACATGCAAGACCAGTTGATCTGGATCCACATGGTGAAAAATTAATCCAGgtatgtgcactgcatggccttgtatttttgtgtggtatttatcagttttttgtactcacaggttgcaagttatctgtggtagctagaagttctaccttggtttatgtttttttttttttgcag
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