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CCAGTTGCGTTTGGACCCAGCTAGCAGCAGCACTCTTCCTGCCAGTGGAAATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAACATGGGCAGgtatttcacacacacacccttctcccctcttcttgaatgtggcatatcttttttactttttacaactgaaccaatacagtactataaagatcgtgtaaga...
species | Zea mays |
transcript | GRMZM2G017421_T02 |
intron # | 18 |
splice site | 5' |
intron type | U2 |
EST: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAACATGGGCAG AAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGACEST: gi|67023698|gb|CO452447.1|CO452447
genomic: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAACATGGGCAGgtatttcaca ... tgcctcatagAAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGAC
EST: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAACATGGGCAG AAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGACEST: gi|32907233|gb|CF012046.1|CF012046
genomic: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAACATGGGCAGgtatttcaca ... tgcctcatagAAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGAC
EST: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAGCATGGGCAG AAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGACEST: gi|78023543|gb|DV491930.1|DV491930
genomic: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAACATGGGCAGgtatttcaca ... tgcctcatagAAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGAC
EST: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAGCATGGGCAG AAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGACEST: gi|60354854|gb|DN221827.1|DN221827
genomic: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAACATGGGCAGgtatttcaca ... tgcctcatagAAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGAC
EST: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAGCATGGGCAG AAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGACEST: gi|50336251|gb|CO531377.1|CO531377
genomic: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAACATGGGCAGgtatttcaca ... tgcctcatagAAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGAC
EST: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAACATGGGCAG AAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGACEST: gi|50336252|gb|CO531378.1|CO531378
genomic: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAACATGGGCAGgtatttcaca ... tgcctcatagAAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGAC
EST: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAACATGGGCAG AAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGACEST: gi|32907234|gb|CF012047.1|CF012047
genomic: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAACATGGGCAGgtatttcaca ... tgcctcatagAAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGAC
EST: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAGCATGGGCAG AAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGACEST: gi|6022680|gb|AW067608.1|AW067608
genomic: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAACATGGGCAGgtatttcaca ... tgcctcatagAAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGAC
EST: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAACATGGGCAG AAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGAC
genomic: ATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAACATGGGCAGgtatttcaca ... tgcctcatagAAACCACTTGCAATGCGTATCCGGATGTCTTACAAAGTGAATGGTGAAGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCAGTTGCGTTTGGACCCAGCTAGCAGCAGCACTCTTCCTGCCAGTGGAAATGTGTCAGTCACACAAAGCCTCAGTGTCACTAACAACCAACATGGGCAGgtatttcacacacacacccttctcccctcttcttgaatgtggcatatcttttttactttttacaactgaaccaatacagtactataaagatcgtgtaaga
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