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CTCTACTTTTGGTGATGGTCTTGAAAGAGAATTACCAGCATGCCTTCCCATACTCGTTGACAGGATGGGTAATGAAATTACAAGACTTACAGCTGTCAAGgtaagtttttgactgcttgcgtttgataccaatacttaattggaggttttaacatcgtgcattgcttgtttatggcatatttaatattaaagaacaaatg...
species | Zea mays |
transcript | GRMZM2G168629_T01 |
intron # | 17 |
splice site | 5' |
intron type | U2 |
EST: TACTCGTTGACAGGATGGGTAATGAAATTACAAGACTTACAGCTGTCAAG GCATTTTCAGTTATTGCGAATTCACCTCTACGTATTGATCTCTCGTGTGTCEST: gi|22489194|gb|BU049130.1|BU049130
genomic: TACTCGTTGACAGGATGGGTAATGAAATTACAAGACTTACAGCTGTCAAGgtaagttttt ... cacttgacagGCATTTTCAGTTATTGCGAATTCACCTCTACGTATTGATCTCTCGTGTGTC
EST: TACTCGTTGACAGGATGGGTAATGAAATTACAAGACTTACAGCTGTCAAG GCATTTTCAGTTATTGCGAATTCACCTCTACGTATTGATCTCTCGTGTGTCEST: gi|211432450|gb|FL213954.1|FL213954
genomic: TACTCGTTGACAGGATGGGTAATGAAATTACAAGACTTACAGCTGTCAAGgtaagttttt ... cacttgacagGCATTTTCAGTTATTGCGAATTCACCTCTACGTATTGATCTCTCGTGTGTC
EST: TACTCGTTGACAGGATGGGTAATGAAATTACAAGACTTACAGCTGTCAAG GCATTTTCAGTTATTGCGAATTCACCTCTACGTATTGATCTCTCGTGTGTCEST: gi|87298767|gb|DY470770.1|DY470770
genomic: TACTCGTTGACAGGATGGGTAATGAAATTACAAGACTTACAGCTGTCAAGgtaagttttt ... cacttgacagGCATTTTCAGTTATTGCGAATTCACCTCTACGTATTGATCTCTCGTGTGTC
EST: TACTCGTTGACAGGATGGGTAATGAAATTACAAGACTTACAGCTGTCAAG GCATTTTCAGTTATTGCGAATTCACCTCTACGTATTGATCTCTCGTGTGTCEST: gi|61118518|gb|DN559479.1|DN559479
genomic: TACTCGTTGACAGGATGGGTAATGAAATTACAAGACTTACAGCTGTCAAGgtaagttttt ... cacttgacagGCATTTTCAGTTATTGCGAATTCACCTCTACGTATTGATCTCTCGTGTGTC
EST: TACTCGTTGACAGGATGGGTAATGAAATTACAAGACTTACAGCTGTCAAG GCATTTTCAGTTATTGEST: gi|32859371|gb|CD999052.1|CD999052
genomic: TACTCGTTGACAGGATGGGTAATGAAATTACAAGACTTACAGCTGTCAAGgtaagttttt ... cacttgacagGCATTTTCAGTTATTG
EST: TACTCGTTGACAGGATGGGTAATGAAATTACAAGACTTACAGCTGTCAAG GCATTTTCAGGTATTGCGAATTCACCTCTACGTATTGATCTCTCGTGTGTCEST: gi|211432451|gb|FL213955.1|FL213955
genomic: TACTCGTTGACAGGATGGGTAATGAAATTACAAGACTTACAGCTGTCAAGgtaagttttt ... cacttgacagGCATTTTCAGTTATTGCGAATTCACCTCTACGTATTGATCTCTCGTGTGTC
EST: TACTCGTTGACAGGATGGGTAATGAAATTACAAGACTTACAGCTGTCAAG GCATTTTCAGTTATTGCGAATTCACCTCTACGTATTGATCTCTCGTGTGTC
genomic: TACTCGTTGACAGGATGGGTAATGAAATTACAAGACTTACAGCTGTCAAGgtaagttttt ... cacttgacagGCATTTTCAGTTATTGCGAATTCACCTCTACGTATTGATCTCTCGTGTGTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCTACTTTTGGTGATGGTCTTGAAAGAGAATTACCAGCATGCCTTCCCATACTCGTTGACAGGATGGGTAATGAAATTACAAGACTTACAGCTGTCAAGgtaagtttttgactgcttgcgtttgataccaatacttaattggaggttttaacatcgtgcattgcttgtttatggcatatttaatattaaagaacaaatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aagaacaa