1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' |
TGCTATTCTTATGGAGTATATTGGCAAGGATGACTCAAACATTCGTATTGGAGCAATATTGGGTCTTGGAATTGCATATGCTGGTTCCCAGAAAGAAGAGgtgggaactagtgcttataattgtgtcttactgcctcataatttggtgttgttttgttaatcagtactgtttctaattttcag
species | Zea mays |
transcript | GRMZM2G155384_T02 |
intron # | 16 |
splice site | 5' |
intron type | U2 |
EST: GAGCAATATTGGGTCTTGGAATTGCATATGCTGGTTCCCAGAAAGAAGAG CTTAAAATGCATCTATCTGCTGTGTTGGGAGACTCCCAATCACCTCTTGAGEST: gi|32943723|gb|CF048542.1|CF048542
genomic: GAGCAATATTGGGTCTTGGAATTGCATATGCTGGTTCCCAGAAAGAAGAGgtgggaacta ... taattttcagCTTAAAATGCATCTATCTGCTGTGTTGGGAGACTCCCAATCACCTCTTGAG
EST: GAGCAATATTGGGTCTTGGAATTGCATATGCTGGTTCCCAGAAAGAAGAG CTTAAAATGCATCTATCTGCTGTGTTGGGAGACTCCCAATCACCTCTTGAGEST: gi|32929231|gb|CF034043.1|CF034043
genomic: GAGCAATATTGGGTCTTGGAATTGCATATGCTGGTTCCCAGAAAGAAGAGgtgggaacta ... taattttcagCTTAAAATGCATCTATCTGCTGTGTTGGGAGACTCCCAATCACCTCTTGAG
EST: GAGCAATATTGGGTCTTGGAATTGCATATGCTGGTTCCCAGAAAGAAGAG CTTAAAATGCATCTATCTGCTGTGTTGGGAGACTCCCAATCACCTCTTGAGEST: gi|32848175|gb|CD987856.1|CD987856
genomic: GAGCAATATTGGGTCTTGGAATTGCATATGCTGGTTCCCAGAAAGAAGAGgtgggaacta ... taattttcagCTTAAAATGCATCTATCTGCTGTGTTGGGAGACTCCCAATCACCTCTTGAG
EST: GAGCAATATTGGGTCTTGGAATTGCATATGCTGGTTCCCAGAAAGAAGAG CTTAAAATGCATCTATCTGCTGTGTTGGGAGACTCCCAATCACCTCTTGAGEST: gi|32928692|gb|CF033504.1|CF033504
genomic: GAGCAATATTGGGTCTTGGAATTGCATATGCTGGTTCCCAGAAAGAAGAGgtgggaacta ... taattttcagCTTAAAATGCATCTATCTGCTGTGTTGGGAGACTCCCAATCACCTCTTGAG
EST: GAGCAATATTGGGTCTTGGAATTGCATATGCTGGTTCCCAGAAAGAAGAG CTTAAAATGCATCTATCTGCTGTGTTGGGAGACTCCCAATCACCTCTTGAG
genomic: GAGCAATATTGGGTCTTGGAATTGCATATGCTGGTTCCCAGAAAGAAGAGgtgggaacta ... taattttcagCTTAAAATGCATCTATCTGCTGTGTTGGGAGACTCCCAATCACCTCTTGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCTATTCTTATGGAGTATATTGGCAAGGATGACTCAAACATTCGTATTGGAGCAATATTGGGTCTTGGAATTGCATATGCTGGTTCCCAGAAAGAAGAGgtgggaactagtgcttataattgtgtcttactgcctcataatttggtgttgttttgttaatcagtactgtttctaattttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG