1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
ACCTACGGCATTCTTTTCTACTCCAGAAAAACCTAAGGAGGCTCAGTCCCAACACAACAAGGAACATTCTGGCAGCCATGATTTCAGTCTGCACAGAAAGgtaaactgtttcctttacacaagctgctaaaaagtgtcatgatgcgtatcacgccatgtaaacttagtccacctatcaagaatccaaagggaaaaagaag...
species | Zea mays |
transcript | GRMZM5G837018_T02 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: AAGACAACAAGGAACATTCTGGCAGCCATGATTTCAGTCTGCACAGAAAG GATCTGTGGTCCACGGAAAGGAAATGACGGGCCTCGAGATCCTTCTGGTEST: gi|32928858|gb|CF033670.1|CF033670
genomic: AACACAACAAGGAACATTCTGGCAGCCATGATTTCAGTCTGCACAGAAAGgtaaactgtt ... tgccgtgcagGATCTGTGGTCCACGGAAAGGAAATGACGGGCCTCGAGATCCTTCTGGT
EST: AAGACAACAAGGAACATTCTGGCAGCCATGATTTCAGTCTGCACAGAAAG GATCTGTGGTCCACGGAAAGGAAATGACGGGCCTCGAGATCCTTCTGGTEST: gi|32929234|gb|CF034046.1|CF034046
genomic: AACACAACAAGGAACATTCTGGCAGCCATGATTTCAGTCTGCACAGAAAGgtaaactgtt ... tgccgtgcagGATCTGTGGTCCACGGAAAGGAAATGACGGGCCTCGAGATCCTTCTGGT
EST: AAGACAAAAAAGAACATTCTGGCAGCCACGATTTCAGTCTGCACAGAAAG GATCTGTGGTCCACGGAAAGGAAATGACGGGCCTCGAGATCCTTCTGGTEST: gi|32929010|gb|CF033822.1|CF033822
genomic: AACACAACAAGGAACATTCTGGCAGCCATGATTTCAGTCTGCACAGAAAGgtaaactgtt ... tgccgtgcagGATCTGTGGTCCACGGAAAGGAAATGACGGGCCTCGAGATCCTTCTGGT
EST: AAGACAACAAGGAACATTCTGGCAGCCATGATTTCAGTCTGCACAGAAAG GATCTGTGGTCCACGGAAAGGAAATGACAGGCCTCGAGATCCTTCTGGTEST: gi|32929217|gb|CF034029.1|CF034029
genomic: AACACAACAAGGAACATTCTGGCAGCCATGATTTCAGTCTGCACAGAAAGgtaaactgtt ... tgccgtgcagGATCTGTGGTCCACGGAAAGGAAATGACGGGCCTCGAGATCCTTCTGGT
EST: AAGACAACAAGGAACATTCTGGCAGCCATGATTTCAGTCTGCACAGAAAG GATCTGTGGTCCACGGAAAGGAAATGACGGGCCTCGAGATCCTTCTGGTEST: gi|32928591|gb|CF033403.1|CF033403
genomic: AACACAACAAGGAACATTCTGGCAGCCATGATTTCAGTCTGCACAGAAAGgtaaactgtt ... tgccgtgcagGATCTGTGGTCCACGGAAAGGAAATGACGGGCCTCGAGATCCTTCTGGT
EST: AAGACAACAAGGAACATTCTGGCAGCCACGATTTCAGTCTGCACAGAAAG GATCTGTGGTCCACGGAAAGGAAATGACGGGCCTCGAGATCCTTCTGGT
genomic: AACACAACAAGGAACATTCTGGCAGCCATGATTTCAGTCTGCACAGAAAGgtaaactgtt ... tgccgtgcagGATCTGTGGTCCACGGAAAGGAAATGACGGGCCTCGAGATCCTTCTGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCTACGGCATTCTTTTCTACTCCAGAAAAACCTAAGGAGGCTCAGTCCCAACACAACAAGGAACATTCTGGCAGCCATGATTTCAGTCTGCACAGAAAGgtaaactgtttcctttacacaagctgctaaaaagtgtcatgatgcgtatcacgccatgtaaacttagtccacctatcaagaatccaaagggaaaaagaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA