1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' |
GGGGTACGGCCTGCTGCTGAGGCAGAGAGACCAGGATCTTCTGgtaatgcattttactgcaaatgcatttgtaacagtttatatttaaacattagagaattactatttataagagaattccatcgttgagttttgtttggttt...
species | Zea mays |
transcript | GRMZM2G129155_T02 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: ACGGCCTGCTGCTGAGGCAGAGAGACCAGGATCTTCTG GTAGTGGAAGCACATCTTTCTGGAATCAAATATTTACTTCCAATGAGGACCEST: gi|88758145|gb|DY542286.1|DY542286
genomic: ACGGCCTGCTGCTGAGGCAGAGAGACCAGGATCTTCTGgtaatgcatt ... atatttttagGTAGTGGAAGCACATCTTTCTGGAATCAAATATTTACTTCCAATGAGGACC
EST: GGGGTACGGCCTGCTGCTGAGGCAGAGAGACCAGGATCTTCTG GTAGTGGAAGCACATCTTTCTGGAATCAAATATTTACTTCCAATGAGGACCEST: gi|211302450|gb|FL244056.1|FL244056
genomic: GGGGTACGGCCTGCTGCTGAGGCAGAGAGACCAGGATCTTCTGgtaatgcatt ... atatttttagGTAGTGGAAGCACATCTTTCTGGAATCAAATATTTACTTCCAATGAGGACC
EST: GGGGTACGGCCTACTGCTGAGGCAGAGAGACCAGGATCTTCTG GTAGTGGAAGCACATCTTTCTGGAATCAAATATTTACTTCCAATGAGGACC
genomic: GGGGTACGGCCTGCTGCTGAGGCAGAGAGACCAGGATCTTCTGgtaatgcatt ... atatttttagGTAGTGGAAGCACATCTTTCTGGAATCAAATATTTACTTCCAATGAGGACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGGTACGGCCTGCTGCTGAGGCAGAGAGACCAGGATCTTCTGgtaatgcattttactgcaaatgcatttgtaacagtttatatttaaacattagagaattactatttataagagaattccatcgttgagttttgtttggttt
- - - - - TGCTGC
- - - - - - GCTGCT