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ATAGAAGGTAATCTTGCCCAGGCTGAGGATGCCATTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAACGCAACAAATATTgtaagcatacatacctttatcaaaacgactagtagacacttgatacatgactgctctaaactgcattgtgtcaatgtcaactgcag
species | Zea mays |
transcript | GRMZM2G108416_T01 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAACGCAACAAATATT TTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTTEST: gi|148969666|gb|EE020531.2|EE020531
genomic: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAACGCAACAAATATTgtaagcatac ... tcaactgcagTTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTT
EST: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAACGCAACAAATATT TTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTTEST: gi|6827209|gb|AW330852.1|AW330852
genomic: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAACGCAACAAATATTgtaagcatac ... tcaactgcagTTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTT
EST: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAATGCAACAAATATT TTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTTEST: gi|211381070|gb|FL456665.1|FL456665
genomic: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAACGCAACAAATATTgtaagcatac ... tcaactgcagTTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTT
EST: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAACGCAACAAATATT TTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTTEST: gi|78179722|gb|DV550095.1|DV550095
genomic: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAACGCAACAAATATTgtaagcatac ... tcaactgcagTTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTT
EST: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAATGCAACAAATATT TTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTTEST: gi|149084134|gb|EE173537.2|EE173537
genomic: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAACGCAACAAATATTgtaagcatac ... tcaactgcagTTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTT
EST: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAACGCAACAAATATT TTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTTEST: gi|60352318|gb|DN219291.1|DN219291
genomic: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAACGCAACAAATATTgtaagcatac ... tcaactgcagTTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTT
EST: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAACGCAACAAATATT TTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTTEST: gi|78115926|gb|DV534314.1|DV534314
genomic: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAACGCAACAAATATTgtaagcatac ... tcaactgcagTTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTT
EST: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAACGCAACAAATATT TTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTTEST: gi|12058174|gb|BF733074.1|BF733074
genomic: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAACGCAACAAATATTgtaagcatac ... tcaactgcagTTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTT
EST: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAATGCAACAAATATT TTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTT
genomic: TTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAACGCAACAAATATTgtaagcatac ... tcaactgcagTTTATGGTCAAAAAGGGAATTGTATTGACACCTCATGCTGACTATTGCCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAGAAGGTAATCTTGCCCAGGCTGAGGATGCCATTATGCTAGATAAGGATGGCTTTGTATCAGAAACAAACGCAACAAATATTgtaagcatacatacctttatcaaaacgactagtagacacttgatacatgactgctctaaactgcattgtgtcaatgtcaactgcag
- - - - - - - - - - - - - - - - - - - - - - - AGGATG