1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
GCTTATGTCACTGCCTACTCCTTTGGTATGGGTGCCATTCCATGGATCATAATGGCTGAGgtatagtcacatataactaatttagctcataagatgcttgaggcacatgatgaaaggattctaaatgaaggcttaatctcgaaactttgcatattggcag
species | Zea mays |
transcript | GRMZM2G098679_T01 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: CTGCCTACTCCTTTGGTATGGGTGCCATTCCATGGATCATAATGGCTGAG ATCCTTCCAGTTAGCATCAAGAGTGTGGCAGGAAGCTTTGCGACCCTAGCCEST: gi|60401580|gb|DN234387.1|DN234387
genomic: CTGCCTACTCCTTTGGTATGGGTGCCATTCCATGGATCATAATGGCTGAGgtatagtcac ... atattggcagATCCTTCCAGTTAGCATCAAGAGTGTGGCAGGAAGCTTTGCGACCCTAGCC
EST: CTGCCTACTCCTTTGGTATGGGTGCCATTCCATGGATCATAATGGCTGAG ATCCTTCCAGTTAGCATCAAGAGTGTGGCAGGAAGCTTTGCGACCCTAGCCEST: gi|211280254|gb|FL478194.1|FL478194
genomic: CTGCCTACTCCTTTGGTATGGGTGCCATTCCATGGATCATAATGGCTGAGgtatagtcac ... atattggcagATCCTTCCAGTTAGCATCAAGAGTGTGGCAGGAAGCTTTGCGACCCTAGCC
EST: CTGCCTACTCCTTTGGTATGGGTGCCATTCCATGGATCATAATGGSTGAG ATCCTTCCAGTTAGCATCAAGAGTGTGGCAGGAAGCTTTGCGACCCTAGCCEST: gi|40333857|gb|CK367927.1|CK367927
genomic: CTGCCTACTCCTTTGGTATGGGTGCCATTCCATGGATCATAATGGCTGAGgtatagtcac ... atattggcagATCCTTCCAGTTAGCATCAAGAGTGTGGCAGGAAGCTTTGCGACCCTAGCC
EST: CTGCCTACTCCTTTGGTATGGGTGCCATTCCATGGATCATAATGGCTGAG ATCCTTCCAGTTAGCATCAAGAGTGTGGCAGGAAGCTTTGCGACCCTAGCCEST: gi|148953878|gb|EC899256.2|EC899256
genomic: CTGCCTACTCCTTTGGTATGGGTGCCATTCCATGGATCATAATGGCTGAGgtatagtcac ... atattggcagATCCTTCCAGTTAGCATCAAGAGTGTGGCAGGAAGCTTTGCGACCCTAGCC
EST: CTGCCTACTCCTTTGGTATGGGTGCCATTCCATGGATCATAATGGCTGAG ATCCTTCCAGTTAGCATCAAGAGTGTGGCAGGAAGCTTTGCGACCCTAGCCEST: gi|211084269|gb|FL474824.1|FL474824
genomic: CTGCCTACTCCTTTGGTATGGGTGCCATTCCATGGATCATAATGGCTGAGgtatagtcac ... atattggcagATCCTTCCAGTTAGCATCAAGAGTGTGGCAGGAAGCTTTGCGACCCTAGCC
EST: CTGCCTACTCCTTTGGTATGGGTGCCATTCCATGGATCATAATGGCTGAG ATCCTTCCAGTTAGCATCAAGAGTGTGGCAGGAAGCTTTGCGACCCTAGCCEST: gi|60350539|gb|DN217512.1|DN217512
genomic: CTGCCTACTCCTTTGGTATGGGTGCCATTCCATGGATCATAATGGCTGAGgtatagtcac ... atattggcagATCCTTCCAGTTAGCATCAAGAGTGTGGCAGGAAGCTTTGCGACCCTAGCC
EST: CTGCCTACTCCTTTGGTATGGGTGCCATTCCATGGATCATAATGGCTGAG ATCCTTCCAGTTAGCATCAAGAGTGTGGCAGGAAGCTTTGCGACCCTAGCC
genomic: CTGCCTACTCCTTTGGTATGGGTGCCATTCCATGGATCATAATGGCTGAGgtatagtcac ... atattggcagATCCTTCCAGTTAGCATCAAGAGTGTGGCAGGAAGCTTTGCGACCCTAGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTTATGTCACTGCCTACTCCTTTGGTATGGGTGCCATTCCATGGATCATAATGGCTGAGgtatagtcacatataactaatttagctcataagatgcttgaggcacatgatgaaaggattctaaatgaaggcttaatctcgaaactttgcatattggcag
- - - - - - - - - - - - - - - - - - - - CATGGA