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TGGTGCTTCGGAGCCTGATTGGGCATCCCTGAACCTTGGAATTCTTTTATGCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAGgtatactagaagccttatctgcaacttacatgaacaaaagtttgatcgcataaatgtagaattcatatatatttttctatcagaatttgttgatagtctt...
species | Zea mays |
transcript | GRMZM2G059225_T02 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: GCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAG GTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAACEST: gi|93016491|gb|EB642011.1|EB642011
genomic: GCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAGgtatactaga ... gtattggcagGTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAAT
EST: GCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAG GTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAATEST: gi|60338936|gb|DN205909.1|DN205909
genomic: GCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAGgtatactaga ... gtattggcagGTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAAT
EST: GGGGTACACAGAAATATGGGTGTGCATATATATAAG GTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAATEST: gi|60354506|gb|DN221479.1|DN221479
genomic: GGGGTACACAGAAATATGGGTGTGCATATATCTAAGgtatactaga ... gtattggcagGTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAAT
EST: GCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAG GTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAATEST: gi|60337093|gb|DN204066.1|DN204066
genomic: GCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAGgtatactaga ... gtattggcagGTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAAT
EST: GCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAG GTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAATEST: gi|60353668|gb|DN220641.1|DN220641
genomic: GCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAGgtatactaga ... gtattggcagGTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAAT
EST: GCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAG GTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAATEST: gi|60354512|gb|DN221485.1|DN221485
genomic: GCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAGgtatactaga ... gtattggcagGTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAAT
EST: GCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAG GTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAATEST: gi|60395181|gb|DN228050.1|DN228050
genomic: GCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAGgtatactaga ... gtattggcagGTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAAT
EST: GCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAG GTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAATEST: gi|50332291|gb|CO527417.1|CO527417
genomic: GCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAGgtatactaga ... gtattggcagGTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAAT
EST: GCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAG GTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAAT
genomic: GCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAGgtatactaga ... gtattggcagGTAAGATCCCTGACGCTTGATGTCAGGGTTTGGGAGCAATCTGTAATCAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGTGCTTCGGAGCCTGATTGGGCATCCCTGAACCTTGGAATTCTTTTATGCATAGAGTGTTCGGGGGTACACAGAAATATGGGTGTGCATATATCTAAGgtatactagaagccttatctgcaacttacatgaacaaaagtttgatcgcataaatgtagaattcatatatatttttctatcagaatttgttgatagtctt
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