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GAGCAAAGCAGCCTAGCTATGTTGTTACTGCCGATGATGTGGACACTTTACTCGCCATTGAAGTCCAGCCCCTAGATGATAGGAAAAGGAAGgtacttatcttgtcatatgattgataatgatctttgttctatgatgcgatgctgtacttttttccaaacataatcgttgcagtagactgcaatagtatca...
species | Zea mays |
transcript | GRMZM2G036206_T01 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: ACACTTTACTCGCCATTGAAGTCCAGCCCCTAGATGATAGGAAAAGGAAG GGAGACTTTATCAAGGTTTATGCTAACGGGCAGAGGAAAATTTCATGTGEST: gi|7844204|gb|AW787426.1|AW787426
genomic: ACACTTTACTCGCCATTGAAGTCCAGCCCCTAGATGATAGGAAAAGGAAGgtacttatct ... tctgttgcagGGAGACTTTATCAAGGTTTATGCTAACGGGCAGAGGAAAATTTCATGTG
EST: ACACTTTACTCGCCATTGAAGTCCAGCCCCTAGATGATAGGAAAAGGAAG GGAGACTTTATCAAGGTTTATGCTAACGGGCAGAGGAAAATTTCATGTGEST: gi|12046854|gb|BF729006.1|BF729006
genomic: ACACTTTACTCGCCATTGAAGTCCAGCCCCTAGATGATAGGAAAAGGAAGgtacttatct ... tctgttgcagGGAGACTTTATCAAGGTTTATGCTAACGGGCAGAGGAAAATTTCATGTG
EST: ACACTTTACTCGCCATTGAAGTCCAGCCCCTAGATGATAGGAAAAGGAAG GGAGACTTTATCAAGGTTTEST: gi|7844203|gb|AW787425.1|AW787425
genomic: ACACTTTACTCGCCATTGAAGTCCAGCCCCTAGATGATAGGAAAAGGAAGgtacttatct ... tctgttgcagGGAGACTTTATCAAGGTTT
EST: ACACTTTACTCGCCATTGAAGTCCAGCCCCTAGATGATAGGAAAAGGAAG GGAGACTTTATCAAGGTTTATGCTAACGGGCAGAGGAAAATTTCATGTGEST: gi|7844205|gb|AW787427.1|AW787427
genomic: ACACTTTACTCGCCATTGAAGTCCAGCCCCTAGATGATAGGAAAAGGAAGgtacttatct ... tctgttgcagGGAGACTTTATCAAGGTTTATGCTAACGGGCAGAGGAAAATTTCATGTG
EST: ACACTTTACTCGCCATTGAAGTCCAGCCCCTAGATGATAGGAAAAGGAAG GGAGACTTTATCAAGGTTTATGCTAACGGGCAGAGGAAAATTTCATGTG
genomic: ACACTTTACTCGCCATTGAAGTCCAGCCCCTAGATGATAGGAAAAGGAAGgtacttatct ... tctgttgcagGGAGACTTTATCAAGGTTTATGCTAACGGGCAGAGGAAAATTTCATGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGCAAAGCAGCCTAGCTATGTTGTTACTGCCGATGATGTGGACACTTTACTCGCCATTGAAGTCCAGCCCCTAGATGATAGGAAAAGGAAGgtacttatcttgtcatatgattgataatgatctttgttctatgatgcgatgctgtacttttttccaaacataatcgttgcagtagactgcaatagtatca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA