1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
GCTGCAGTGTATGGAATTGGCATTTGTGCCGAATGTGGTGGTTCTGCATTTAGGCCTCACACTGGGGgtatggtttgtatctatgttgtattcgatttatgtatgcatttgttattcgatgctgttaacaatcttgtttatttctacag
species | Zea mays |
transcript | GRMZM2G033619_T01 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: TGGCATTTGTGCCGAATGTGGTGGTTCTGCATTTAGGCCTCACACTGGGG AGGCCCTATCCAGATTATACAATGTAATCAAACATCCTAATGCCCTGGATTEST: gi|19351428|gb|BM895945.1|BM895945
genomic: TGGCATTTGTGCCGAATGTGGTGGTTCTGCATTTAGGCCTCACACTGGGGgtatggtttg ... atttctacagAGGCCCTATCCAGATTATACAATGTAATCAAACATCCTAATGCCCTGGATT
EST: TGGCATTTGTGCCGAATGTGGTGGTTCTGCATTTAGGCCTCACACTGGGG AGGCCCTATCCAGATTATACAATGTAATCAAACATCCTAATGCCCTGGATTEST: gi|87151915|gb|DY396704.1|DY396704
genomic: TGGCATTTGTGCCGAATGTGGTGGTTCTGCATTTAGGCCTCACACTGGGGgtatggtttg ... atttctacagAGGCCCTATCCAGATTATACAATGTAATCAAACATCCTAATGCCCTGGATT
EST: TGGCATTTGTGCCGAATGTGGTGGTTCTGCATTTAGGCCTCACACTGGGG AGGCCCTATCCAGATTATACAATGTAATCAAACATCCTAATGCCCTGGATTEST: gi|14203062|gb|BG836739.1|BG836739
genomic: TGGCATTTGTGCCGAATGTGGTGGTTCTGCATTTAGGCCTCACACTGGGGgtatggtttg ... atttctacagAGGCCCTATCCAGATTATACAATGTAATCAAACATCCTAATGCCCTGGATT
EST: GCCTCACACTGGGG A-GCCCTATCCAGATTATACAATGTAATCAAACATCCTAATGCCCTGGATTEST: gi|60401098|gb|DN233905.1|DN233905
genomic: GCCTCACACTGGGGgtatggtttg ... atttctacagAGGCCCTATCCAGATTATACAATGTAATCAAACATCCTAATGCCCTGGATT
EST: TGGCATTTGTGCCGAATGTGGTGGTTCTGCATTTAGGCCTCACACTGGGG AGGCCCTATCCAGATTATACAATGTAATCAAACATCCTAATGCCCTGGATTEST: gi|211177497|gb|FL246406.1|FL246406
genomic: TGGCATTTGTGCCGAATGTGGTGGTTCTGCATTTAGGCCTCACACTGGGGgtatggtttg ... atttctacagAGGCCCTATCCAGATTATACAATGTAATCAAACATCCTAATGCCCTGGATT
EST: TGGCATTTGTGCCGAATGTGGTGGTTTTGCATTTAGGCCTCACACTGGGG AGGCCCTATCCAGATTATATAATGTAATCAAACATCCTAATGCCCTGGATT
genomic: TGGCATTTGTGCCGAATGTGGTGGTTCTGCATTTAGGCCTCACACTGGGGgtatggtttg ... atttctacagAGGCCCTATCCAGATTATACAATGTAATCAAACATCCTAATGCCCTGGATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTGCAGTGTATGGAATTGGCATTTGTGCCGAATGTGGTGGTTCTGCATTTAGGCCTCACACTGGGGgtatggtttgtatctatgttgtattcgatttatgtatgcatttgttattcgatgctgttaacaatcttgtttatttctacag
- - - - - - - - - - - - - - - - - TGGTGG