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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAGTTGTTAGTGAGTGCCAACACATGAACTGGGGTACATTCAAGACTACACTCACGGAAGCTCTAATTGATCATTTGCAGCCTATTCAGgttcaatgacccttgatctgtacagtttgataatttgtaacccttatgcttacccccatccaattggactgaaccattgtatttgacaaatttttagcgatcaagttctttttatttgcatagctaatctccatacgaatccttttctttaactattttttttccacacctttgtag

Basic information

species Zea mays
transcript GRMZM2G177970_T02
intron # 14
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71449703|gb|DR830753.1|DR830753
EST:     TCAAGACTACACTCACGGAAGCTCTAATTGATCATTTGCAGCCTATTCAG                         GTTCGTTATGAGGAGATAATGTCTGATCCAGCCTACTTGGATAATGTCCTT
genomic: TCAAGACTACACTCACGGAAGCTCTAATTGATCATTTGCAGCCTATTCAGgttcaatgac ... acctttgtagGTTCGTTATGAGGAGATAATGTCTGATCCAGCCTACTTGGATAATGTCCTT
EST: gi|78120427|gb|DV538811.1|DV538811
EST:     TCAAGACTACACTCACGGAAGCTCTAATTGATCATTTGCAGCCTATTCAG                         GTTCGTTATGAGGAGATAATGTCTGATCCAGCCTACTTGGATAATGTCCTT
genomic: TCAAGACTACACTCACGGAAGCTCTAATTGATCATTTGCAGCCTATTCAGgttcaatgac ... acctttgtagGTTCGTTATGAGGAGATAATGTCTGATCCAGCCTACTTGGATAATGTCCTT