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AATAAATGTAACGTGGGATATGCATTCATCAATATGACGGATCCACAGCAGATAGTTCCATTTTACAAGgtatgttcctgtgcccataccttgatacctgacagtaagggaaaatatatctagtttaactccagaattggatgtgagaagattaactatagctgatacttctgtgcag
species | Zea mays |
transcript | GRMZM2G156956_T02 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: ATGCATTCATCAATATGACGGATCCCCAGCAGATAGTTCCTTTTTCCAAG ACATTCACCGGCAAGAAATGGGAGAAGTTCAATAGTGAGAAAGTGGCATCAEST: gi|60394908|gb|DN227777.1|DN227777
genomic: ATGCATTCATCAATATGACGGATCCACAGCAGATAGTTCCATTTTACAAGgtatgttcct ... ttctgtgcagACATTCAACGGCAAGAAATGGGAGAAGTTCAATAGTGAGAAAGTGGCATCA
EST: ATGCATTCATCAATATGACGGATCCACAGCAGATAGTTCCATTTTACAAG ACATTCAACGGCAAGAAATGGGAGAAGTTCAATAGTGAGAAAGTGGCATCAEST: gi|5915119|gb|AW052760.1|AW052760
genomic: ATGCATTCATCAATATGACGGATCCACAGCAGATAGTTCCATTTTACAAGgtatgttcct ... ttctgtgcagACATTCAACGGCAAGAAATGGGAGAAGTTCAATAGTGAGAAAGTGGCATCA
EST: ATGCATTCATCAATATGACGGATCCACAGCAGATAGTTCCATTTTACAAG ACATTCAACGGCAAGAAATGGGAGAAGTTCAATAGTGAGAAAGTGGCATCAEST: gi|67012060|gb|CO440809.1|CO440809
genomic: ATGCATTCATCAATATGACGGATCCACAGCAGATAGTTCCATTTTACAAGgtatgttcct ... ttctgtgcagACATTCAACGGCAAGAAATGGGAGAAGTTCAATAGTGAGAAAGTGGCATCA
EST: TGCATTCATC-TTATGACGGATCCACAGCAGATAGTTCCATTTTACAAG ACATTCAACGGCAAGAAATGGGAGAAGTTCAATAGTGAGAAAGTGGCATCAEST: gi|71332239|gb|DR803045.1|DR803045
genomic: TGCATTCATCAATATGACGGATCCACAGCAGATAGTTCCATTTTACAAGgtatgttcct ... ttctgtgcagACATTCAACGGCAAGAAATGGGAGAAGTTCAATAGTGAGAAAGTGGCATCA
EST: ATGCATTCATCAATATGACGGATCCACAGCAGATAGTTCCATTTTACAAG ACATTCAACGGCAAGAAATGGGAGAAGTTCAATAGTGAGAAAGTGGCATCAEST: gi|32851005|gb|CD990686.1|CD990686
genomic: ATGCATTCATCAATATGACGGATCCACAGCAGATAGTTCCATTTTACAAGgtatgttcct ... ttctgtgcagACATTCAACGGCAAGAAATGGGAGAAGTTCAATAGTGAGAAAGTGGCATCA
EST: ATGCATTCATCAATATGACGGATCCACAGCAGATAGTTCCATTTTACAAG ACATTCAACGGCAAGAAATGGGAGAAGTTCAATAGTGAGAAAGTGGCATCA
genomic: ATGCATTCATCAATATGACGGATCCACAGCAGATAGTTCCATTTTACAAGgtatgttcct ... ttctgtgcagACATTCAACGGCAAGAAATGGGAGAAGTTCAATAGTGAGAAAGTGGCATCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATAAATGTAACGTGGGATATGCATTCATCAATATGACGGATCCACAGCAGATAGTTCCATTTTACAAGgtatgttcctgtgcccataccttgatacctgacagtaagggaaaatatatctagtttaactccagaattggatgtgagaagattaactatagctgatacttctgtgcag
- - - - - - - - - - - - - - - - - - - - - - - GCAGAT