1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAGgtaagtaataacactagtcatgtgagaatggggtgtgtaaatatttcaattttgtttcacaaacacgcatgagatgtctgtcatttttaaattttttcat...
species | Zea mays |
transcript | GRMZM2G107309_T02 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAG GTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCAEST: gi|211440335|gb|FL443588.1|FL443588
genomic: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAGgtaagtaata ... tgaaatgcagGTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCA
EST: GATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAG GTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCAEST: gi|71763326|gb|DR961263.1|DR961263
genomic: GATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAGgtaagtaata ... tgaaatgcagGTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCA
EST: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAG GTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCAEST: gi|211183239|gb|FL432688.1|FL432688
genomic: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAGgtaagtaata ... tgaaatgcagGTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCA
EST: ATMCAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAG GTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCAEST: gi|9732030|gb|BE510782.1|BE510782
genomic: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAGgtaagtaata ... tgaaatgcagGTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCA
EST: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAG GTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCAEST: gi|32930071|gb|CF034883.1|CF034883
genomic: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAGgtaagtaata ... tgaaatgcagGTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCA
EST: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAG GTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCAEST: gi|211416078|gb|FK952656.1|FK952656
genomic: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAGgtaagtaata ... tgaaatgcagGTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCA
EST: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAG GTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCAEST: gi|32932636|gb|CF037448.1|CF037448
genomic: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAGgtaagtaata ... tgaaatgcagGTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCA
EST: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAG GTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCAEST: gi|71445686|gb|DR826736.1|DR826736
genomic: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAGgtaagtaata ... tgaaatgcagGTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCA
EST: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAG GTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCAEST: gi|91050278|gb|EB160696.1|EB160696
genomic: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAGgtaagtaata ... tgaaatgcagGTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCA
EST: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAG GTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCAEST: gi|32866012|gb|CF005694.1|CF005694
genomic: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAGgtaagtaata ... tgaaatgcagGTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCA
EST: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAG GTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCAEST: gi|32834913|gb|CD974591.1|CD974591
genomic: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAGgtaagtaata ... tgaaatgcagGTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCA
EST: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAG GTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCA
genomic: ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAGgtaagtaata ... tgaaatgcagGTCCTACTTGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAGgtaagtaataacactagtcatgtgagaatggggtgtgtaaatatttcaattttgtttcacaaacacgcatgagatgtctgtcatttttaaattttttcat
- - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - CTGAAG