1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' |
GTTGGAAGTGCTCTGTCAGATCCTTATCTTTCTTTCGCAGCGGCTCTAAATGGGTTAGCTGGGCCACTACATGGCCTTGCAAATCAGgtatgctcagtttggcgtactagatcttatctggtacaatctctgctttatgcttccttttacttgtagattttgaaaaaaaaaggtttccatcaataac...
species | Zea mays |
transcript | GRMZM2G064023_T03 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: CAGCGGCTCTAAATGGGTTAGCTGGGCCACTACATGGCCTTGCAAATCAG GAAGTGCTTCTATGGATCAAATCTGTAATTCAGGAAACTGGGAGTGATGTTEST: gi|71450119|gb|DR831169.1|DR831169
genomic: CAGCGGCTCTAAATGGGTTAGCTGGGCCACTACATGGCCTTGCAAATCAGgtatgctcag ... tatattgcagGAAGTGCTTCTATGGATCAAATCTGTAATTCAGGAAACTGGGAGTGATGTT
EST: ATGGGTTAGCTGGGCCACTACATGGCCTTGCAAATCAG GAAGTGCTTCTATGGATCAAATCTGTAATTCAGGAAACTGGGAGTGATGTTEST: gi|31361054|gb|CD445411.1|CD445411
genomic: ATGGGTTAGCTGGGCCACTACATGGCCTTGCAAATCAGgtatgctcag ... tatattgcagGAAGTGCTTCTATGGATCAAATCTGTAATTCAGGAAACTGGGAGTGATGTT
EST: CAGCGGCTCTAAATGGGTTAGCTGGGCCACTACATGGCCTTGCAAATCAG GAAGTGCTTCTATGGATCAAATCTGTAATTCAGGAAACTGGGAGTGATGTTEST: gi|76284364|gb|DV023932.1|DV023932
genomic: CAGCGGCTCTAAATGGGTTAGCTGGGCCACTACATGGCCTTGCAAATCAGgtatgctcag ... tatattgcagGAAGTGCTTCTATGGATCAAATCTGTAATTCAGGAAACTGGGAGTGATGTT
EST: CTTGCAAATCAG GAAGTGCTTCTATGGATCAAATCTGTAATTCAGGAAACTGGGAGTGATGTTEST: gi|6952534|gb|AW424602.1|AW424602
genomic: CTTGCAAATCAGgtatgctcag ... tatattgcagGAAGTGCTTCTATGGATCAAATCTGTAATTCAGGAAACTGGGAGTGATGTT
EST: CAGCGGCTCTAAATGGGTTAGCTGGGCCACTACATGGCCTTGCAAATCAG GAAGTGCTTCTATGGATCAAATCTGTAATTCAGGAAACTGGGAGTGATGTTEST: gi|5915419|gb|AW053060.1|AW053060
genomic: CAGCGGCTCTAAATGGGTTAGCTGGGCCACTACATGGCCTTGCAAATCAGgtatgctcag ... tatattgcagGAAGTGCTTCTATGGATCAAATCTGTAATTCAGGAAACTGGGAGTGATGTT
EST: CAGCGGCTCTAAATGGGTTAGCTGGGCCACTACATGGCCTTGCAAATCAG GAAGTGCTTCTATGGATCAAATCTGTAATTCAGGAAACTGGGAGTGATGTT
genomic: CAGCGGCTCTAAATGGGTTAGCTGGGCCACTACATGGCCTTGCAAATCAGgtatgctcag ... tatattgcagGAAGTGCTTCTATGGATCAAATCTGTAATTCAGGAAACTGGGAGTGATGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGGAAGTGCTCTGTCAGATCCTTATCTTTCTTTCGCAGCGGCTCTAAATGGGTTAGCTGGGCCACTACATGGCCTTGCAAATCAGgtatgctcagtttggcgtactagatcttatctggtacaatctctgctttatgcttccttttacttgtagattttgaaaaaaaaaggtttccatcaataac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaaaaaa