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GTGCAATCAGACGTATGTTCTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTGgtgagtaaggacaccatcactgccctaatgtttcaagtgtgtatagcactaacatgtttgctaactaaaaactgctctcag
species | Zea mays |
transcript | GRMZM2G040720_T03 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: CTTGAATGTCAAAACAAATGTCATCTATCTCCGTCTGAGAGTGATTATTG AAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCCTGAEST: gi|60338335|gb|DN205308.1|DN205308
genomic: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTGgtgagtaagg ... ctgctctcagAAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGA
EST: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTG AAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGAEST: gi|37381459|gb|CF627617.1|CF627617
genomic: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTGgtgagtaagg ... ctgctctcagAAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGA
EST: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTG AAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGAEST: gi|37390531|gb|CF632497.1|CF632497
genomic: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTGgtgagtaagg ... ctgctctcagAAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGA
EST: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTG AAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGAEST: gi|211465177|gb|FL447936.1|FL447936
genomic: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTGgtgagtaagg ... ctgctctcagAAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGA
EST: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTG AAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGAEST: gi|60341736|gb|DN208709.1|DN208709
genomic: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTGgtgagtaagg ... ctgctctcagAAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGA
EST: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTG ------CGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGAEST: gi|71305468|gb|DR788864.1|DR788864
genomic: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTGgtgagtaagg ... ctgctctcagAAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGA
EST: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTG AAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGAEST: gi|60344633|gb|DN211606.1|DN211606
genomic: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTGgtgagtaagg ... ctgctctcagAAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGA
EST: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTG AAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGAEST: gi|211412948|gb|FL027548.1|FL027548
genomic: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTGgtgagtaagg ... ctgctctcagAAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGA
EST: ATCTCCGTCTGAGAGTGATTATTG AAATAGCGGTATTATTAGCTAAAGCAAATGGCGCCAAGCAGAAAGTCGTGAEST: gi|40336243|gb|CK370313.1|CK370313
genomic: ATCTCCGTCTGAGAGTGATTATTGgtgagtaagg ... ctgctctcagAAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGA
EST: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTG AAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGAEST: gi|86474242|gb|DY240612.1|DY240612
genomic: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTGgtgagtaagg ... ctgctctcagAAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGA
EST: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTG AAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGA
genomic: CTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTGgtgagtaagg ... ctgctctcagAAATAGCGGTATTATTAGCTAAAGCAAATGGTGCCAAGCAGAAAGTCGTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGCAATCAGACGTATGTTCTTGAATGTCAAAACAAATGTCAGCTATCTCCGTCTGAGAGTGATTATTGgtgagtaaggacaccatcactgccctaatgtttcaagtgtgtatagcactaacatgtttgctaactaaaaactgctctcag
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