1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' |
TGCTGGAATTCCATTACCTTGTCGTGCAGCTGAATATTCTAGCAAACCCAATGGAACTCAGCAGCATGTGAAGCGTACTAACTTATGGGGATGGAGCAATgtaagcaataagtctgctcttctgctgcttttcccttcatatgttcatattttttaatgctacgtagctagacctatagttctgtaacattttccgctga...
species | Zea mays |
transcript | GRMZM2G036872_T02 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: ATGGAACTCAGCAGCATGTGAAGCGTACTAACTTATGGGGATGGAGCAAT GTGAGAAAGGGCCAACGATEST: gi|67039042|gb|CO465297.1|CO465297
genomic: ATGGAACTCAGCAGCATGTGAAGCGTACTAACTTATGGGGATGGAGCAATgtaagcaata ... gcttatgcagGTGAGAAAGGGCCAACGAT
EST: ATGGAACTCAGCAGCATGTGAAGCGTACTAACTTATGGGGATGGAGCAAT GTGAGAAAGGGCCAACGATCGGAGTTAGTTGATCCATCAGGTGAAGAAGAEST: gi|211048682|gb|FL410396.1|FL410396
genomic: ATGGAACTCAGCAGCATGTGAAGCGTACTAACTTATGGGGATGGAGCAATgtaagcaata ... gcttatgcagGTGAGAAAGGGCCAACGATCGGAGTTAGTTGATCCATCAGGTGAAGAAGA
EST: ATGGAACTCAGCAGCATGTGAAGCGTACTAACTTATGGGGATGGAGCAAT GTGAGAAAGGGCCAACGATCGGAGTTAGTTGATCCATCAGGTGAAGAAGAEST: gi|87154043|gb|DY398832.1|DY398832
genomic: ATGGAACTCAGCAGCATGTGAAGCGTACTAACTTATGGGGATGGAGCAATgtaagcaata ... gcttatgcagGTGAGAAAGGGCCAACGATCGGAGTTAGTTGATCCATCAGGTGAAGAAGA
EST: ATGGAACTCAGCAGCATGTGAAGCGTACTAACTTATGGGGATGGAGCAAT GTGAGAAAGGGCCAACGATCGGAGTTAGTTGATCCATCAGGTGAAGAAGAEST: gi|211424197|gb|FL420637.1|FL420637
genomic: ATGGAACTCAGCAGCATGTGAAGCGTACTAACTTATGGGGATGGAGCAATgtaagcaata ... gcttatgcagGTGAGAAAGGGCCAACGATCGGAGTTAGTTGATCCATCAGGTGAAGAAGA
EST: ATGGAACTCAGCAGCATGTGAAGCGTACTAACTTATGGGGATGGAGCAAT GTGAGAAAGGGCCAACGATCGGAGTTAGTTGATCCATCAGGTGAAGAAGAEST: gi|211207671|gb|FL419156.1|FL419156
genomic: ATGGAACTCAGCAGCATGTGAAGCGTACTAACTTATGGGGATGGAGCAATgtaagcaata ... gcttatgcagGTGAGAAAGGGCCAACGATCGGAGTTAGTTGATCCATCAGGTGAAGAAGA
EST: ATGGAACTCAGCAGCATGTGAAGCGTACTAACTTATGGGGATGGAGCAAT GTGAGAAAGGGCCAACGATCGGAGTTAGTTGATCCATCAGGTGAAGAAGA
genomic: ATGGAACTCAGCAGCATGTGAAGCGTACTAACTTATGGGGATGGAGCAATgtaagcaata ... gcttatgcagGTGAGAAAGGGCCAACGATCGGAGTTAGTTGATCCATCAGGTGAAGAAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCTGGAATTCCATTACCTTGTCGTGCAGCTGAATATTCTAGCAAACCCAATGGAACTCAGCAGCATGTGAAGCGTACTAACTTATGGGGATGGAGCAATgtaagcaataagtctgctcttctgctgcttttcccttcatatgttcatattttttaatgctacgtagctagacctatagttctgtaacattttccgctga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA