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CTACATATTCAAAGGGAAGTCACCTTATACATTGAAGCATGGGAGACCCGATCATGAAGCAACAGACgtgagtctgcagtgctgctgttgctcatagtgataactgcttttgtttgaaacaaaacattcgaatgcgtgtcagtctcattttgttgccactgagagtgacaaaagacttcattgtggacag
species | Zea mays |
transcript | GRMZM2G032222_T02 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: GATCATGAAGCAACAGAC ACGGCCAATCTGCATGCGCCTATTCAATATCCTAAACCAGATGGACATATAEST: gi|94479206|gb|EB708164.1|EB708164
genomic: GATCATGAAGCAACAGACgtgagtctgc ... ttgtggacagACGGCCAATCTGCATGCGCCTATTCAATATCCTAAACCAGATGGACATATA
EST: AGTCACCTTATACATTGAAGCATGGGAGACCCGATCATGAAGCAACAGAC ACGGCCAATCTGCATGCGCCTATTCAATATCCTAAACCAGATGGACATATAEST: gi|71756373|gb|DR954310.1|DR954310
genomic: AGTCACCTTATACATTGAAGCATGGGAGACCCGATCATGAAGCAACAGACgtgagtctgc ... ttgtggacagACGGCCAATCTGCATGCGCCTATTCAATATCCTAAACCAGATGGACATATA
EST: AGTCACCTTATACATTGAAGCATGGGAGACCCGATCATGAAGCAACAGAC ACGGCCAATCTGCATGCGCCTATTCAATATCCTAAACCAGATGGACATATAEST: gi|87157160|gb|DY401949.1|DY401949
genomic: AGTCACCTTATACATTGAAGCATGGGAGACCCGATCATGAAGCAACAGACgtgagtctgc ... ttgtggacagACGGCCAATCTGCATGCGCCTATTCAATATCCTAAACCAGATGGACATATA
EST: AGTCACCTTATACATTGAAGCATGGGAGACCCGATCATGAAGCAACAGAC ACGGCCAATCTGCATGCGCCTATTCAATATCCTAAACCAGATGGACATATAEST: gi|31353246|gb|CD437603.1|CD437603
genomic: AGTCACCTTATACATTGAAGCATGGGAGACCCGATCATGAAGCAACAGACgtgagtctgc ... ttgtggacagACGGCCAATCTGCATGCGCCTATTCAATATCCTAAACCAGATGGACATATA
EST: AGTCACCTTATACATTGAAGCATGGGAGACCCGATCATGAAGCAACAGAC ACGGCCAATCTGCATGCGCCTATTCAATATCCTAAACCAGATGGACATATAEST: gi|76020278|gb|DT947448.1|DT947448
genomic: AGTCACCTTATACATTGAAGCATGGGAGACCCGATCATGAAGCAACAGACgtgagtctgc ... ttgtggacagACGGCCAATCTGCATGCGCCTATTCAATATCCTAAACCAGATGGACATATA
EST: ATTGAAGCATGGGAGACCCGATCATGAAGCAACAGAC ACGGCCAATCTGCATGCGCCTATTCAATATCCTAAACCAGATGGACATATA
genomic: ATTGAAGCATGGGAGACCCGATCATGAAGCAACAGACgtgagtctgc ... ttgtggacagACGGCCAATCTGCATGCGCCTATTCAATATCCTAAACCAGATGGACATATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTACATATTCAAAGGGAAGTCACCTTATACATTGAAGCATGGGAGACCCGATCATGAAGCAACAGACgtgagtctgcagtgctgctgttgctcatagtgataactgcttttgtttgaaacaaaacattcgaatgcgtgtcagtctcattttgttgccactgagagtgacaaaagacttcattgtggacag
- - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA