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CAAATTTTATTGAACCAGCACATGACAAACAAGATTTTGAGAGGACACCATTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTGgtaagtgcttcgcccagatctttccttgtgcacctcaatattctaggcaaatacacaactattcctataccacattgaatatgtagcagaagaaaaaaag...
species | Zea mays |
transcript | GRMZM2G021864_T01 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTG GAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAGEST: gi|32931903|gb|CF036715.1|CF036715
genomic: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTGgtaagtgctt ... gtctttgcagGAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAG
EST: TTGTTTATTCGGCTAGAAACAGGACTTAGACAAATTATTATTGATTTCTG GAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAGEST: gi|211458170|gb|FL127582.1|FL127582
genomic: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTGgtaagtgctt ... gtctttgcagGAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAG
EST: TATTGATTTCTG GAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAGEST: gi|89758497|gb|DY687658.1|DY687658
genomic: TATTGATTTCTGgtaagtgctt ... gtctttgcagGAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAG
EST: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTG GAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAGEST: gi|211460681|gb|FL127583.1|FL127583
genomic: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTGgtaagtgctt ... gtctttgcagGAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAG
EST: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTG GAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAGEST: gi|32934210|gb|CF039022.1|CF039022
genomic: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTGgtaagtgctt ... gtctttgcagGAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAG
EST: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTG GAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAGEST: gi|211404582|gb|FL228991.1|FL228991
genomic: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTGgtaagtgctt ... gtctttgcagGAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAG
EST: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTG GAAAGAAAGGTGCCATTTGATTGGTTAC-AGCCAATGGATCCACATTTAAGEST: gi|211460682|gb|FL127584.1|FL127584
genomic: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTGgtaagtgctt ... gtctttgcagGAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAG
EST: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTG GAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAGEST: gi|32930527|gb|CF035339.1|CF035339
genomic: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTGgtaagtgctt ... gtctttgcagGAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAG
EST: TTGTTTATTCGGCTAGAAACAAGGCTTAGACAAATTACTATTGATTTCTG GAAAGAAAGGAGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAGEST: gi|5915604|gb|AW053245.1|AW053245
genomic: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTGgtaagtgctt ... gtctttgcagGAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAG
EST: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTG GAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAGEST: gi|5361116|gb|AI795731.1|AI795731
genomic: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTGgtaagtgctt ... gtctttgcagGAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAG
EST: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTG GAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAGEST: gi|211404583|gb|FL228992.1|FL228992
genomic: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTGgtaagtgctt ... gtctttgcagGAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAG
EST: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGAYTTCTG GAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAGEST: gi|78106768|gb|DV525186.1|DV525186
genomic: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTGgtaagtgctt ... gtctttgcagGAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAG
EST: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTG GAAAGAAAGGTGCCATTTGATTGGTTACCCGCCAATGGATCCCCATTTAAGEST: gi|91054831|gb|EB165249.1|EB165249
genomic: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTGgtaagtgctt ... gtctttgcagGAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAG
EST: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTG GAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAGEST: gi|12968788|gb|BG265825.1|BG265825
genomic: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTGgtaagtgctt ... gtctttgcagGAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAG
EST: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTG GAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAG
genomic: TTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTGgtaagtgctt ... gtctttgcagGAAAGAAAGGTGCCATTTGATTGGTTACCAGCCAATGGATCCACATTTAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAATTTTATTGAACCAGCACATGACAAACAAGATTTTGAGAGGACACCATTGTTTATTCGGCTAGAAACAAGACTTAGACAAATTATTATTGATTTCTGgtaagtgcttcgcccagatctttccttgtgcacctcaatattctaggcaaatacacaactattcctataccacattgaatatgtagcagaagaaaaaaag
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