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TTGGAAGATGGTTCCTTGGATGAAAATGTAGAATCTTTTTTATCGCAAGATGACATGGATCCTCGAGAAACAATGGGACGCTGCATGGATTCTAGTAAAGgtttgttactatttcccactgatgccttgctcttcttgagtcagtcggataatagctattattatttttctcatgccttttggtttggaatatgaatatt...
species | Zea mays |
transcript | GRMZM2G361398_T02 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: ATGGATCCTCGAGAAACAATGGGACGCTGCATGGATTCTAGTAAAG GG-TGGGTTTTACTGAGGTTGCAAAAGCCCGTGCGAGTACAAACAAAGTTGEST: gi|166502240|gb|EG039410.1|EG039410
genomic: ATGGATCCTCGAGAAACAATGGGACGCTGCATGGATTCTAGTAAAGgtttgttact ... tttgtagcagGGTTGGGTTTTACTGAGGTTGCAAAAGCCCGTGCGAGTACAAACAAAGTTG
EST: TGACATGGATCCTCGAGAAACAATGGGACGCTGCATGGATTCTAGTAAAG GGTTGGGTTTTACTGAGGTTGCAAAAGCCCGTGCGAGTACEST: gi|51593024|gb|CV072170.1|CV072170
genomic: TGACATGGATCCTCGAGAAACAATGGGACGCTGCATGGATTCTAGTAAAGgtttgttact ... tttgtagcagGGTTGGGTTTTACTGAGGTTGCAAAAGCCCGTGCGAGTAC
EST: TGACATGGATCCTCGAGAAACAATGGGACGCTGCATGGATTCTAGTAAAG GGTTGGGTTTTACTGAGGTTGCAAAAGCCCGTGCGAGTACAAACAAAGTTGEST: gi|31358706|gb|CD443063.1|CD443063
genomic: TGACATGGATCCTCGAGAAACAATGGGACGCTGCATGGATTCTAGTAAAGgtttgttact ... tttgtagcagGGTTGGGTTTTACTGAGGTTGCAAAAGCCCGTGCGAGTACAAACAAAGTTG
EST: ATGGATCCTCGAGAAACAATGGGACGCTGCATGGATTCTAGTAAAG GGTTGGGTTTTACTGAGGTTGCAAAAGCCCGTGCGAGTACAAACAAAGTTG
genomic: ATGGATCCTCGAGAAACAATGGGACGCTGCATGGATTCTAGTAAAGgtttgttact ... tttgtagcagGGTTGGGTTTTACTGAGGTTGCAAAAGCCCGTGCGAGTACAAACAAAGTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGGAAGATGGTTCCTTGGATGAAAATGTAGAATCTTTTTTATCGCAAGATGACATGGATCCTCGAGAAACAATGGGACGCTGCATGGATTCTAGTAAAGgtttgttactatttcccactgatgccttgctcttcttgagtcagtcggataatagctattattatttttctcatgccttttggtttggaatatgaatatt
- - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA