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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AATCAAACAAAATCCCAAGAATCAACAAGAGTAGACGTTGTCTACAACACAACACAGCGAGgtaaacgatgcaaccaagacttcaaataaacccaaactttgctgcatgattgaagtatcctactgttgtatcgcag

Basic information

species Zea mays
transcript GRMZM2G174114_T01
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|60350086|gb|DN217059.1|DN217059
EST:     ATCCCAAGAATCAACAAGAGTAGACGTTGTCTACAACACAACACAGCGAG                         GAATATTTTGGATCGTCGGAGCCAAAATTCAGATGNNNNNNNCATGTTCGT
genomic: ATCCCAAGAATCAACAAGAGTAGACGTTGTCTACAACACAACACAGCGAGgtaaacgatg ... tgtatcgcagGAATATTTTGGATCGTCGGAGCCAAAATTCAGATGAAAAAAACATGTTCGT
EST: gi|37389283|gb|CF631860.1|CF631860
EST:     ATCCCAAGAATCAACAAGAGTAGACGTTGTCTACAACACAACACAGCGAG                         GAATATTTTGGATCGTCGGAGCCAAAATTCAGATGNNNNNNNCATGTTCGT
genomic: ATCCCAAGAATCAACAAGAGTAGACGTTGTCTACAACACAACACAGCGAGgtaaacgatg ... tgtatcgcagGAATATTTTGGATCGTCGGAGCCAAAATTCAGATGAAAAAAACATGTTCGT
EST: gi|83278170|gb|DV942178.1|DV942178
EST:     ATCCCAAGAATCAACAAGAGTAGACGTTGTCTACAACACAACACAGCGAG                         GAATATTTTGGATCGTCGGAGCCAAAATTCAGATGNNNNNNNCATGTTCGT
genomic: ATCCCAAGAATCAACAAGAGTAGACGTTGTCTACAACACAACACAGCGAGgtaaacgatg ... tgtatcgcagGAATATTTTGGATCGTCGGAGCCAAAATTCAGATGAAAAAAACATGTTCGT