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TAATATATTTCGTGTTTTCGGTCGTCCTCCGGGAAGCATAGAGGCAACAACTTTGGAAGCAAGTAGGAACCCAATGAGgtatattttacatgtgccttctaattgtttgatatgtgccttaacctctacctatccattactggggacaaggacaccatttatttgatcaattgcgtaa...
species | Zea mays |
transcript | GRMZM2G165418_T02 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: CCGGGAAGCATAGAGGCAACAACTTTGGAAGCAAGTAGGAACCCAATGAG GCGTCAGATTGCAAATCCAGCAAGGCCCACACGGACACTAACTTCTTTTGCEST: gi|33090978|gb|CF050972.1|CF050972
genomic: CCGGGAAGCATAGAGGCAACAACTTTGGAAGCAAGTAGGAACCCAATGAGgtatatttta ... gtgtgattagGCGTCAGATTGCAAATCCAGCAAGGCCCACACGGACACTAACTTCTTTTGC
EST: CCGGGAAGCATAGAGGCAACAACTTTGGAAGCAAGTAGGAACCCAATGAG GCGTCAGATTGCAAATCCAGCAAGGCCCACACGGACACTAACTTCTTTTGCEST: gi|37397098|gb|CF635844.1|CF635844
genomic: CCGGGAAGCATAGAGGCAACAACTTTGGAAGCAAGTAGGAACCCAATGAGgtatatttta ... gtgtgattagGCGTCAGATTGCAAATCCAGCAAGGCCCACACGGACACTAACTTCTTTTGC
EST: CGGGAAGCATAGAGGCAACAAC-TTGGAAAGCAAGTAGGAACCCAATGAG GCGTCAGATTGCAAATCCAGCAAGGCCCACACGGACACTAACTTCTTTTGCEST: gi|71419453|gb|DR804773.1|DR804773
genomic: CGGGAAGCATAGAGGCAACAACTTTGG-AAGCAAGTAGGAACCCAATGAGgtatatttta ... gtgtgattagGCGTCAGATTGCAAATCCAGCAAGGCCCACACGGACACTAACTTCTTTTGC
EST: CCGGGAAGCATAGAGGCAACAACTTTGGAAGCAAGTAGGAACCCAATGAG GCGTCAGATTGCAAATCCAGCAAGGCCCACACGGACACTAACTTCTTTTGCEST: gi|83278851|gb|DV942859.1|DV942859
genomic: CCGGGAAGCATAGAGGCAACAACTTTGGAAGCAAGTAGGAACCCAATGAGgtatatttta ... gtgtgattagGCGTCAGATTGCAAATCCAGCAAGGCCCACACGGACACTAACTTCTTTTGC
EST: CCGGGAAGCATAGAGGCAACAACTTTGGAAGCAAGTAGGAACCCAATGAG GCGTCAGATTGCAAATCCAGCAAGGCCCACACGGACACTAACTTCTTTTGCEST: gi|24934367|gb|CA452585.1|CA452585
genomic: CCGGGAAGCATAGAGGCAACAACTTTGGAAGCAAGTAGGAACCCAATGAGgtatatttta ... gtgtgattagGCGTCAGATTGCAAATCCAGCAAGGCCCACACGGACACTAACTTCTTTTGC
EST: CCGGGAAGCATAGAGGCAACAACTTTGGAAGCAAGTAGGAACCCAATGAG GCGTCAGATTGCAAATCCAGCAAGGCCCACACGGACACTAACTTCTTTTGC
genomic: CCGGGAAGCATAGAGGCAACAACTTTGGAAGCAAGTAGGAACCCAATGAGgtatatttta ... gtgtgattagGCGTCAGATTGCAAATCCAGCAAGGCCCACACGGACACTAACTTCTTTTGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAATATATTTCGTGTTTTCGGTCGTCCTCCGGGAAGCATAGAGGCAACAACTTTGGAAGCAAGTAGGAACCCAATGAGgtatattttacatgtgccttctaattgtttgatatgtgccttaacctctacctatccattactggggacaaggacaccatttatttgatcaattgcgtaa
- - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG