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ACTTTGGAGATGCAACTGGCCAAGGGAGTGGATCTATCAGGTCAGCAAATTTCCAAGGCCACGTCTTCGCTACATCTAACCCTGTACCAACAAACCAAAGgtattgccacctaagaccttgtttgtttacaccaatccagctctggattagaatggattggaattaaatccatgtcccaaataaaccaagcctactcaat...
species | Zea mays |
transcript | GRMZM2G156638_T02 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: TTCCAAGGCCACGTCTTCGCTACATCTAACCCTGTACCAACAAACC--A- A--AGATCAATTATTTCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAGEST: gi|113703304|gb|EE680808.1|EE680808
genomic: TTCCAAGGCCACGTCTTCGCTACATCTAACCCTGTACCAACAAACCAAAGgtattgccac ... ttggttacagAGCAGATCAATTATTTCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAG
EST: TTCCAAGGCCACGTCTTCGCTACATCTAACCCTGTACCAACAAACCAAAG AGCAGATCAATTATTTCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAGEST: gi|33100101|gb|CF060061.1|CF060061
genomic: TTCCAAGGCCACGTCTTCGCTACATCTAACCCTGTACCAACAAACCAAAGgtattgccac ... ttggttacagAGCAGATCAATTATTTCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAG
EST: GTACCGACAAACCAAAG AGCAGATCAATTATTTCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAGEST: gi|211523712|gb|FL481395.1|FL481395
genomic: GTACCAACAAACCAAAGgtattgccac ... ttggttacagAGCAGATCAATTATTTCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAG
EST: TTCCAAGGCCACGTCTTCGCTACATCTAACCCTGTACCAACAAACCAAAG AGCAGWTCAATTATTYCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAGEST: gi|14244490|gb|BG842508.2|BG842508
genomic: TTCCAAGGCCACGTCTTCGCTACATCTAACCCTGTACCAACAAACCAAAGgtattgccac ... ttggttacagAGCAGATCAATTATTTCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAG
EST: TTCCAAGGCCACGTCTTCGCTACATCTAACCCTGTACCAACAAACCAAAG AGCAGATCAATTATTTCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAGEST: gi|28986772|gb|CB351302.1|CB351302
genomic: TTCCAAGGCCACGTCTTCGCTACATCTAACCCTGTACCAACAAACCAAAGgtattgccac ... ttggttacagAGCAGATCAATTATTTCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAG
EST: TTCCAAGGCCACGTCTTCGCTACATCTAACCCTGTACCAACAAACCAAAG AGCAGATCAATTATTTCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAGEST: gi|14204013|gb|BG837690.1|BG837690
genomic: TTCCAAGGCCACGTCTTCGCTACATCTAACCCTGTACCAACAAACCAAAGgtattgccac ... ttggttacagAGCAGATCAATTATTTCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAG
EST: TTCCAAGGCCACGTCTTCGCTACATCTAACCCTGTACCAACAAACCAAWG WKYWKWTCAATTATTTCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAGEST: gi|71758986|gb|DR956923.1|DR956923
genomic: TTCCAAGGCCACGTCTTCGCTACATCTAACCCTGTACCAACAAACCAAAGgtattgccac ... ttggttacagAGCAGATCAATTATTTCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAG
EST: TTCCAAGGCCACGTCTTCGCTACATCTAACCCTGTACCAACAAACCAAAG AGCAGATCAATTATTTCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAGEST: gi|8102613|gb|AW927416.1|AW927416
genomic: TTCCAAGGCCACGTCTTCGCTACATCTAACCCTGTACCAACAAACCAAAGgtattgccac ... ttggttacagAGCAGATCAATTATTTCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAG
EST: TTCCAAGGCCACGTTTTCGCTACATCTAACCCTGTACCAACAAACCAAAG AGCAGATCAATTATTTCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAG
genomic: TTCCAAGGCCACGTCTTCGCTACATCTAACCCTGTACCAACAAACCAAAGgtattgccac ... ttggttacagAGCAGATCAATTATTTCATGTGTCTTCTCAAGGATTGAGTGCCCATTCCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTTTGGAGATGCAACTGGCCAAGGGAGTGGATCTATCAGGTCAGCAAATTTCCAAGGCCACGTCTTCGCTACATCTAACCCTGTACCAACAAACCAAAGgtattgccacctaagaccttgtttgtttacaccaatccagctctggattagaatggattggaattaaatccatgtcccaaataaaccaagcctactcaat
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