1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GCGGCAGGTCCAGACTACCTCTAGAGCTACCAGATCCCTAAGTACTCTGACAAGGGCCGTTAGACGAGgttagcttgatgctttggcatgttagtctgtaaaagaatcttcactgcggctactaatactgtcaaaccttacgcag
species | Zea mays |
transcript | GRMZM2G142334_T02 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: CTCTAGAGCTACCAGATCCCTAAGTACTCTGACAAGGGCCGTTAGACGAG GTGGAGAGAGCACTGTAATAGATGCCAATGGAAATTCCTATGATCTGAGCAEST: gi|67016408|gb|CO445157.1|CO445157
genomic: CTCTAGAGCTACCAGATCCCTAAGTACTCTGACAAGGGCCGTTAGACGAGgttagcttga ... ccttacgcagGTGGAGAGAGCACTGGAATAGATGCCAATGGAAATTCCTATGATCTGAGCA
EST: CTCTAGAGCTACCAGATCCCTAAGTACTCTGACAAGGGCCGTTAGACGAG GTGGAGAGAGCACTGGAATAGATGCCAATGGAAATTCCTTTGATCTGAGCAEST: gi|71417754|gb|DR804198.1|DR804198
genomic: CTCTAGAGCTACCAGATCCCTAAGTACTCTGACAAGGGCCGTTAGACGAGgttagcttga ... ccttacgcagGTGGAGAGAGCACTGGAATAGATGCCAATGGAAATTCCTATGATCTGAGCA
EST: CTCTAGAGCTACCAGATCCTTAAGTACTCTGACAAGGGCCGTTAGACGAG GTGGAGAGAGCACTGGAATAGATGCCAATGGAAATTCCTATGATCTGAGCAEST: gi|211530906|gb|FL193982.1|FL193982
genomic: CTCTAGAGCTACCAGATCCCTAAGTACTCTGACAAGGGCCGTTAGACGAGgttagcttga ... ccttacgcagGTGGAGAGAGCACTGGAATAGATGCCAATGGAAATTCCTATGATCTGAGCA
EST: CTCTAGAGCTACCAGATCCCTAAGTACTCTGACAAGGGCCGTTAGACGAG GTGGAGAGAGCACTGGAATAGATGCCAATGGAAATTCCTATGATCTGAGCAEST: gi|6012734|gb|AW062171.1|AW062171
genomic: CTCTAGAGCTACCAGATCCCTAAGTACTCTGACAAGGGCCGTTAGACGAGgttagcttga ... ccttacgcagGTGGAGAGAGCACTGGAATAGATGCCAATGGAAATTCCTATGATCTGAGCA
EST: CTCTAGAGCTACCAGATCCCTAAGTACTCTGACAAGGGCCGTTAGACGAG GTGGAGAGAGCACTGGAATAGATGCCAATGGAAATTCCTATGATCTGAGCAEST: gi|211530907|gb|FL193983.1|FL193983
genomic: CTCTAGAGCTACCAGATCCCTAAGTACTCTGACAAGGGCCGTTAGACGAGgttagcttga ... ccttacgcagGTGGAGAGAGCACTGGAATAGATGCCAATGGAAATTCCTATGATCTGAGCA
EST: CTCTAGAGCTACCAGATCCCTAAGTACTCTGACAAGGGCCGTTAGACGAG GTGGAGAGAGCACTGGAATAGATGCCAATGGAAATTCCTATGATCTGAGCA
genomic: CTCTAGAGCTACCAGATCCCTAAGTACTCTGACAAGGGCCGTTAGACGAGgttagcttga ... ccttacgcagGTGGAGAGAGCACTGGAATAGATGCCAATGGAAATTCCTATGATCTGAGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGGCAGGTCCAGACTACCTCTAGAGCTACCAGATCCCTAAGTACTCTGACAAGGGCCGTTAGACGAGgttagcttgatgctttggcatgttagtctgtaaaagaatcttcactgcggctactaatactgtcaaaccttacgcag
- - - - - - - - - - - AGAGCT