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TGCTTGCAGAGTGGAAACCACCAGTTTATGATAACTCTCATGGGATAAAATTGGTTACTGCCACCACACGTCGAAATTCTCCAAATgtaggaattcttcatgattttgtttattttaacttcagctagctttagggtcaatttagatgagcagttttttcttatcttataataagagaattacata...
species | Zea mays |
transcript | GRMZM2G108416_T01 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: CTCATGGGATAAAATTGGTTACTGCCACCACACGTCGAAATTCTCCAAAT AGTATAGATTCCAAGATTCATCACAACAATCTTATCAACAATATTCTGGCAEST: gi|148969666|gb|EE020531.2|EE020531
genomic: CTCATGGGATAAAATTGGTTACTGCCACCACACGTCGAAATTCTCCAAATgtaggaattc ... ctcgtttcagAGTATAGATTCCAAGATTCATCACAACAATCTTATCAACAATATTCTGGCA
EST: TTCATGGGATAAAATTGGTTACTGCCACCACACGTCGAAATTCTCCAAAT AGTATAGATTCCAAGATTCATCACAACAATCTTATCAACAATATTCTGGCAEST: gi|6827209|gb|AW330852.1|AW330852
genomic: CTCATGGGATAAAATTGGTTACTGCCACCACACGTCGAAATTCTCCAAATgtaggaattc ... ctcgtttcagAGTATAGATTCCAAGATTCATCACAACAATCTTATCAACAATATTCTGGCA
EST: CTCATGGGATAAAATTGGTTACTGCCACCACACGTCGAAATTCTCCAAAT AGTATAGATTCCAAGATACATCACAACAATCTTATCAACAATATTCTGGCAEST: gi|211381070|gb|FL456665.1|FL456665
genomic: CTCATGGGATAAAATTGGTTACTGCCACCACACGTCGAAATTCTCCAAATgtaggaattc ... ctcgtttcagAGTATAGATTCCAAGATTCATCACAACAATCTTATCAACAATATTCTGGCA
EST: GTTACTGCCACCACACGTCGAAATTCTCCAAAT AGTATAGATTCCAAGATTCATCACWACAATCTTATCAACAATATTCTGGCAEST: gi|78179722|gb|DV550095.1|DV550095
genomic: GTTACTGCCACCACACGTCGAAATTCTCCAAATgtaggaattc ... ctcgtttcagAGTATAGATTCCAAGATTCATCACAACAATCTTATCAACAATATTCTGGCA
EST: CTCATGGGATAAAATTGGTTACTGCCACCACACGTCGAAATTCTCCAAAT AGTATAGATTCCAAGATACATCACAACAATCTTATCAACAATATTCTGGCAEST: gi|149084134|gb|EE173537.2|EE173537
genomic: CTCATGGGATAAAATTGGTTACTGCCACCACACGTCGAAATTCTCCAAATgtaggaattc ... ctcgtttcagAGTATAGATTCCAAGATTCATCACAACAATCTTATCAACAATATTCTGGCA
EST: TGGGATAAAATTGGTTACTGCCACCACACGTCGAAATTCTCCAAAT AGTATAGATTCCAAGATTCATCACAACAATCTTATCAACAATATTCTGGCAEST: gi|211301117|gb|FL169205.1|FL169205
genomic: TGGGATAAAATTGGTTACTGCCACCACACGTCGAAATTCTCCAAATgtaggaattc ... ctcgtttcagAGTATAGATTCCAAGATTCATCACAACAATCTTATCAACAATATTCTGGCA
EST: CTCATGGGATAAAATTGGTTACTGCCACCACACGTCGTAATTCTCCAAAT AGTATAGATTCCAAGAEST: gi|78115926|gb|DV534314.1|DV534314
genomic: CTCATGGGATAAAATTGGTTACTGCCACCACACGTCGAAATTCTCCAAATgtaggaattc ... ctcgtttcagAGTATAGATTCCAAGA
EST: CTCATGGGATAAAATTGGTTACTGCCACCACACGTCGAAATTCTCCAAAT AGTATAGATTCCAAGATTCATCACAACAATCTTATCAACAATATTCTGGCAEST: gi|12058174|gb|BF733074.1|BF733074
genomic: CTCATGGGATAAAATTGGTTACTGCCACCACACGTCGAAATTCTCCAAATgtaggaattc ... ctcgtttcagAGTATAGATTCCAAGATTCATCACAACAATCTTATCAACAATATTCTGGCA
EST: GATAAAATTGGTTACTGCCACCACACGTCGAAATTCTCCAAAT AGTATAGATTCCAAGATACATCACAACAATCTTATCAACAATATTCTGGCA
genomic: GATAAAATTGGTTACTGCCACCACACGTCGAAATTCTCCAAATgtaggaattc ... ctcgtttcagAGTATAGATTCCAAGATTCATCACAACAATCTTATCAACAATATTCTGGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCTTGCAGAGTGGAAACCACCAGTTTATGATAACTCTCATGGGATAAAATTGGTTACTGCCACCACACGTCGAAATTCTCCAAATgtaggaattcttcatgattttgtttattttaacttcagctagctttagggtcaatttagatgagcagttttttcttatcttataataagagaattacata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aataagag