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GTTCTCAAAGCTATGAAAGAATCCGATTCCCCTCGGCCTGCAGTTTTTGCAATGTCCAACCCTACTACTAAAGgtttgtgcacagacacctacagatagtttgaggataccctgtggtgaaatgctatcttcttttcttttcttttcttttctttgaggggaacccaatgataaaacactaattttgatctctttttattacatcacag
species | Zea mays |
transcript | GRMZM2G085747_T01 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: CGATTCCCCTCGGCCTGCAGTTTTTGCAATGTCCAACCCTACTACTAAAG CTGAATGCACTCCCGATGATGTATTCAAGCATGTTGGAGATAAAGCGATATEST: gi|76919652|gb|DV167818.1|DV167818
genomic: CGATTCCCCTCGGCCTGCAGTTTTTGCAATGTCCAACCCTACTACTAAAGgtttgtgcac ... tacatcacagCTGAATGCACTCCCGATGATGTATTCAAGCATGTTGGAGATAAAGCGATAT
EST: TCCCCTCGGCCTGCAGTTTTTGCAATGTCCAACCCTACTACTAAAG CTGAATGCACTCCCGATGATGTATTCAAGCATGTTGGAGATAAAGCGATATEST: gi|32850587|gb|CD990268.1|CD990268
genomic: TCCCCTCGGCCTGCAGTTTTTGCAATGTCCAACCCTACTACTAAAGgtttgtgcac ... tacatcacagCTGAATGCACTCCCGATGATGTATTCAAGCATGTTGGAGATAAAGCGATAT
EST: CGATTCCCCTCGGCCTGCAGTTTTTGCAATGTCCAACCCTACTACTAAAG CTGAATGCACTCCCGATGATGTATTCAAGCATGTTGGAGATAAAGCGATATEST: gi|40303330|gb|CK347717.1|CK347717
genomic: CGATTCCCCTCGGCCTGCAGTTTTTGCAATGTCCAACCCTACTACTAAAGgtttgtgcac ... tacatcacagCTGAATGCACTCCCGATGATGTATTCAAGCATGTTGGAGATAAAGCGATAT
EST: GCAGTTTTTGCAATGTCCAACCTTACTACTAAAG CTGAATGCACTCCCGATGATGTATTCAAGCATGTTGGAGATAAAGCGATATEST: gi|211281987|gb|FL018040.1|FL018040
genomic: GCAGTTTTTGCAATGTCCAACCCTACTACTAAAGgtttgtgcac ... tacatcacagCTGAATGCACTCCCGATGATGTATTCAAGCATGTTGGAGATAAAGCGATAT
EST: TGATTCCCCTCGGCCTGCAGTTTTTGCAATGTCCAACCCTACTACTAAAG CTGAATGCACTCCCGATGATGTATTCAAGCATGTTGGAGATAAAGCGATATEST: gi|26456270|gb|CA827853.1|CA827853
genomic: CGATTCCCCTCGGCCTGCAGTTTTTGCAATGTCCAACCCTACTACTAAAGgtttgtgcac ... tacatcacagCTGAATGCACTCCCGATGATGTATTCAAGCATGTTGGAGATAAAGCGATAT
EST: CGATTCCCCTCGGCCTGCAGTTTTTGCAATGTCCAACCCTACTACTAAAG CTGAATGCACTCCCGATGATGTATTCAAGCATGTTGGAGATAAAGCGATATEST: gi|22819546|gb|BU499636.1|BU499636
genomic: CGATTCCCCTCGGCCTGCAGTTTTTGCAATGTCCAACCCTACTACTAAAGgtttgtgcac ... tacatcacagCTGAATGCACTCCCGATGATGTATTCAAGCATGTTGGAGATAAAGCGATAT
EST: CGATTCCCCTCGGCCTGCAGTTTTTGCAATGTCCAACCCTACTACTAAAG CTGAATGCACTCCCGATGATGTATTCAAGCATGTTGGAGATAAAGCGATAT
genomic: CGATTCCCCTCGGCCTGCAGTTTTTGCAATGTCCAACCCTACTACTAAAGgtttgtgcac ... tacatcacagCTGAATGCACTCCCGATGATGTATTCAAGCATGTTGGAGATAAAGCGATAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTCTCAAAGCTATGAAAGAATCCGATTCCCCTCGGCCTGCAGTTTTTGCAATGTCCAACCCTACTACTAAAGgtttgtgcacagacacctacagatagtttgaggataccctgtggtgaaatgctatcttcttttcttttcttttcttttctttgaggggaacccaatgataaaacactaattttgatctctttttattacatcacag
- - - - - - - - - - - - - - - - - - CTGCAG