1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
CTGATGAGAGTGTACGGAGCACTGCTGTGGTCGCTCGGGAAAGTCCTGAACACACCAGAAGTCATGCGTGTCTACATAGGgtatggccattcttactgtcgatcagaacttacatttgacaaactaattaaactgtcgatcaggtagcaccatggctgcatcagcgtcactgaaaaacaaacaaaaaactgaaataatcgcctcgatcttctttctag
species | Zea mays |
transcript | GRMZM2G065012_T02 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: TCGCTCGGGAAAGTCCTGAACACACCAGAAGTCATGCGTGTCTACATAGG TTCATTCAACGACAAGCCGATCAGGGAGACAGCGGCTGGGCCGCTGGGCATEST: gi|50323441|gb|CO518567.1|CO518567
genomic: TCGCTCGGGAAAGTCCTGAACACACCAGAAGTCATGCGTGTCTACATAGGgtatggccat ... ttctttctagTTCATTCAACGACAAGCCGATCAGGGAGACAGCGGCTGGGCCGCTGGGCAT
EST: TCGCTCGGGAAAGTCCTGAACACACCAGAAGTCATGCGTGTCTACATAGG TTCATTCAACGACAAGCCGATCAEST: gi|22545340|gb|BU097699.1|BU097699
genomic: TCGCTCGGGAAAGTCCTGAACACACCAGAAGTCATGCGTGTCTACATAGGgtatggccat ... ttctttctagTTCATTCAACGACAAGCCGATCA
EST: TCGCTCGGGAAAGTCCTGAACACACCAGAAGTCATGCGTGTCTACATAGG TTCATTCAACGACAAGCCGATCAGGGAGACAGCGGCTGGGCCGCTGGGCATEST: gi|116827521|gb|EC871429.1|EC871429
genomic: TCGCTCGGGAAAGTCCTGAACACACCAGAAGTCATGCGTGTCTACATAGGgtatggccat ... ttctttctagTTCATTCAACGACAAGCCGATCAGGGAGACAGCGGCTGGGCCGCTGGGCAT
EST: TCGCTCGGGAAAGTCCTGAACACACCAGAAGTCATGCGTGTCTACATAGG TTCATTCAACGACAAGCCGATCAGGGAGACAGCGGCTGGGCCGCTGGGCATEST: gi|211180217|gb|FK950408.1|FK950408
genomic: TCGCTCGGGAAAGTCCTGAACACACCAGAAGTCATGCGTGTCTACATAGGgtatggccat ... ttctttctagTTCATTCAACGACAAGCCGATCAGGGAGACAGCGGCTGGGCCGCTGGGCAT
EST: TCGCTCGGGAAAGTCCTGAACACACCAGAAGTCATGCGTGTCTACATAGG TTCATTCAACGACAAGCCGATCAGGGAGACAGCGGCTGGGCCGK-GGNCATEST: gi|211180216|gb|FK950407.1|FK950407
genomic: TCGCTCGGGAAAGTCCTGAACACACCAGAAGTCATGCGTGTCTACATAGGgtatggccat ... ttctttctagTTCATTCAACGACAAGCCGATCAGGGAGACAGCGGCTGGGCCGCTGGGCAT
EST: TCGCTCGGGAAAGTCCTGAACACACCAGAAGTCATGCGTGTCTACATAGG TTCATTCAACGACAAGCCGATCAGGGAGACAGCGGCTGGG
genomic: TCGCTCGGGAAAGTCCTGAACACACCAGAAGTCATGCGTGTCTACATAGGgtatggccat ... ttctttctagTTCATTCAACGACAAGCCGATCAGGGAGACAGCGGCTGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGATGAGAGTGTACGGAGCACTGCTGTGGTCGCTCGGGAAAGTCCTGAACACACCAGAAGTCATGCGTGTCTACATAGGgtatggccattcttactgtcgatcagaacttacatttgacaaactaattaaactgtcgatcaggtagcaccatggctgcatcagcgtcactgaaaaacaaacaaaaaactgaaataatcgcctcgatcttctttctag
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