1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
AGTTTTGTCTAATAACAAGATAAAAAGGTGGCCTCACACAGTGGTTTCCTCCCTTCCCTGTCTGTCTTCCTTAAAGCTGGACAATAACCCCTTGGTAGAGgtaatataacattcatgtctctttgtatcatttgtcttatggtatatatttggcaaacagaagaatctcaatttgtcaagtcttatggccaatgttgatt...
species | Zea mays |
transcript | GRMZM2G015090_T01 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: TTAAAGCTGGACAATAACCCCTTGGTAGAG ATATCATCCACTGATCTTGTGCCTCTGTCCAAACTTGAAGTACTTGATCTAEST: gi|78109030|gb|DV527447.1|DV527447
genomic: TTAAAGCTGGACAATAACCCCTTGGTAGAGgtaatataac ... tttcttgtagATATCATCCACTGATCTTGTGCCTCTGTCCAAACTTGAAGTACTTGATCTA
EST: CCCTTCCCTGTCTGTCTTCCTTAAAGCTGGACAATAACCCCTTGGTAGAG ATATCATCCACTGATCTTGTGCCTCTGTCCAAACTTGAAGTACTTGATCTAEST: gi|211374390|gb|FK951698.1|FK951698
genomic: CCCTTCCCTGTCTGTCTTCCTTAAAGCTGGACAATAACCCCTTGGTAGAGgtaatataac ... tttcttgtagATATCATCCACTGATCTTGTGCCTCTGTCCAAACTTGAAGTACTTGATCTA
EST: CCCTTCCCTGTCTGTCTTCCTTAAAGCTGGACAATAACCCCTTGGTAGAG ATATCATCCACEST: gi|37399457|gb|CF637057.1|CF637057
genomic: CCCTTCCCTGTCTGTCTTCCTTAAAGCTGGACAATAACCCCTTGGTAGAGgtaatataac ... tttcttgtagATATCATCCAC
EST: CTTAAAGCTGGACAATAACCCCTTGGTAGAG ATATCATCCACTGATCTTGTGCCTCTGTCCAAACTTGAAGTACTTGATCTAEST: gi|211332986|gb|FL087716.1|FL087716
genomic: CTTAAAGCTGGACAATAACCCCTTGGTAGAGgtaatataac ... tttcttgtagATATCATCCACTGATCTTGTGCCTCTGTCCAAACTTGAAGTACTTGATCTA
EST: CCCTTCCCTGTCTGTCTTCCTTAAAGCTGGACAATAACCCCTTGGTAGAG ATATCATCCACTGATCTTGTGCCTCTGTCCAAACTTGAAGTACTTGATCTAEST: gi|211330833|gb|FL087712.1|FL087712
genomic: CCCTTCCCTGTCTGTCTTCCTTAAAGCTGGACAATAACCCCTTGGTAGAGgtaatataac ... tttcttgtagATATCATCCACTGATCTTGTGCCTCTGTCCAAACTTGAAGTACTTGATCTA
EST: CCCTTCCCTGTCTGTCTTCCTTAAAGCTGGACAATAACCCCTTGGTAGAG ATATCATCCACTGATCTTGTGC-TCTGTCCAAACTTGAAGTAC
genomic: CCCTTCCCTGTCTGTCTTCCTTAAAGCTGGACAATAACCCCTTGGTAGAGgtaatataac ... tttcttgtagATATCATCCACTGATCTTGTGCCTCTGTCCAAACTTGAAGTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTTTTGTCTAATAACAAGATAAAAAGGTGGCCTCACACAGTGGTTTCCTCCCTTCCCTGTCTGTCTTCCTTAAAGCTGGACAATAACCCCTTGGTAGAGgtaatataacattcatgtctctttgtatcatttgtcttatggtatatatttggcaaacagaagaatctcaatttgtcaagtcttatggccaatgttgatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaacagaa