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AATGATATTAAAAGTATATCATCTGAAATGGAGGGTAAGACAGAAGAGGAAGTTCAACGTTATGCTAGAGTTTTCAAGGAGAGATACAAGGAACTGAGTGgtaaggcagtaattccaagatagctaatatatagcattttagaaactgcagtttcaacaaatatctaattttgactgacaattttaaggaaatatgcggg...
species | Zea mays |
transcript | GRMZM2G010085_T02 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: AGTTCAACGTTATGCTAGAGTTTTCAAGGAGAGATACAAGGAACTGAGTG ATTATGATAGAATTATAAAAAATATTGAAAGGGGGGAAGCAAGGATATCCCEST: gi|6194488|gb|AW146592.1|AW146592
genomic: AGTTCAACGTTATGCTAGAGTTTTCAAGGAGAGATACAAGGAACTGAGTGgtaaggcagt ... gtacaaccagATTATGATAGAATTATAAAAAATATTGAAAGGGGGGAAGCAAGGATATCCC
EST: AGTTCAACGTTATGCTAGAGTTTTCAAGGAGAGATACAAGGAACTGAGTG ATTATGATAGAATTATAAAAAATATTGAAAGGNGGGAAGCAAGGATATCCCEST: gi|33091506|gb|CF051500.1|CF051500
genomic: AGTTCAACGTTATGCTAGAGTTTTCAAGGAGAGATACAAGGAACTGAGTGgtaaggcagt ... gtacaaccagATTATGATAGAATTATAAAAAATATTGAAAGGGGGGAAGCAAGGATATCCC
EST: AGTTCAACGTTATGCTAGAGTTTTCAAGGAGAGATACAAGGAACTGAGTG ATTATGATAGAATTATAAAAAATATTGAAAGGGGGGAAGCAAGGATATCCCEST: gi|6194533|gb|AW146637.1|AW146637
genomic: AGTTCAACGTTATGCTAGAGTTTTCAAGGAGAGATACAAGGAACTGAGTGgtaaggcagt ... gtacaaccagATTATGATAGAATTATAAAAAATATTGAAAGGGGGGAAGCAAGGATATCCC
EST: AGTTCAACGTTATGCTAGAGTTTTCAAGGAGAGATACAAGGAACTGAGTG ATTATGATAGAATTATAAAAAATATTGAAAGGGGGGAAGCAAGGATATTCCEST: gi|33098069|gb|CF058029.1|CF058029
genomic: AGTTCAACGTTATGCTAGAGTTTTCAAGGAGAGATACAAGGAACTGAGTGgtaaggcagt ... gtacaaccagATTATGATAGAATTATAAAAAATATTGAAAGGGGGGAAGCAAGGATATCCC
EST: AGTTCAACGTTATGCTAGAGTTTTCAAGGAGAGATACAAGGAACTGAGTG ATTATGATAGAATTATAAAAAATATTGAAAGGGGGGAAGCAAGGATATCCC
genomic: AGTTCAACGTTATGCTAGAGTTTTCAAGGAGAGATACAAGGAACTGAGTGgtaaggcagt ... gtacaaccagATTATGATAGAATTATAAAAAATATTGAAAGGGGGGAAGCAAGGATATCCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATGATATTAAAAGTATATCATCTGAAATGGAGGGTAAGACAGAAGAGGAAGTTCAACGTTATGCTAGAGTTTTCAAGGAGAGATACAAGGAACTGAGTGgtaaggcagtaattccaagatagctaatatatagcattttagaaactgcagtttcaacaaatatctaattttgactgacaattttaaggaaatatgcggg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA