1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
GTGATTGCAAATAAGATCAAGCGCTGCAAAACTGACTCATTCCCAGGgtttctctcttctcgcttctgcgctctctctacctctcttttcattattatggaaactcattccattgaactcatatttcag
species | Zea mays |
transcript | GRMZM2G177970_T01 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: GTGATTGCAAATAAGATCAAGCGCTGCAAAACTGACTCATTCCCAGG TATGGAGTTTGACAACCCAGAGAGGCCGAAAAGAAGAAATCTTCTCTCTATEST: gi|32930432|gb|CF035244.1|CF035244
genomic: GTGATTGCAAATAAGATCAAGCGCTGCAAAACTGACTCATTCCCAGGgtttctctct ... catatttcagTATGGAGTTTGACAACCCAGAGAGGCCGGAATGCAGAAATCTTCTCTCTAT
EST: GTGATTGCAAATAAGATCAAGCGCTGCAAAACTGACTCATTCCCAGG TATGGAGTTTGACAACCCAGAGAGGCCGGAATGCAGAAATCTTCTCTCTATEST: gi|71449703|gb|DR830753.1|DR830753
genomic: GTGATTGCAAATAAGATCAAGCGCTGCAAAACTGACTCATTCCCAGGgtttctctct ... catatttcagTATGGAGTTTGACAACCCAGAGAGGCCGGAATGCAGAAATCTTCTCTCTAT
EST: GTGATTGCAAATAAGATCAAGCGCTGCAAAACTGACTCATTCCCAGG TATGGAGTTTGACAACCCAGAGAGGCCGGAATGCAGAAATCTTCTCTCTATEST: gi|32930572|gb|CF035384.1|CF035384
genomic: GTGATTGCAAATAAGATCAAGCGCTGCAAAACTGACTCATTCCCAGGgtttctctct ... catatttcagTATGGAGTTTGACAACCCAGAGAGGCCGGAATGCAGAAATCTTCTCTCTAT
EST: GTGATTGCAAATAAGATCAAGCGCTGCAAAACTGACTCATTCCCAGG TATGGAGTTTGACAACCCAGAGAGGCCGGAATGCAGAAATCTTCTCTCTATEST: gi|78120427|gb|DV538811.1|DV538811
genomic: GTGATTGCAAATAAGATCAAGCGCTGCAAAACTGACTCATTCCCAGGgtttctctct ... catatttcagTATGGAGTTTGACAACCCAGAGAGGCCGGAATGCAGAAATCTTCTCTCTAT
EST: GTGATTGCAAATAAGATCAAGCGCTGCAAAACTGACTCATTCCCAGG TATGGAGTTTGACAACCCAGAGAGGCCGGAATGCAGAAATCTTCTCTCTAT
genomic: GTGATTGCAAATAAGATCAAGCGCTGCAAAACTGACTCATTCCCAGGgtttctctct ... catatttcagTATGGAGTTTGACAACCCAGAGAGGCCGGAATGCAGAAATCTTCTCTCTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGATTGCAAATAAGATCAAGCGCTGCAAAACTGACTCATTCCCAGGgtttctctcttctcgcttctgcgctctctctacctctcttttcattattatggaaactcattccattgaactcatatttcag
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