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TATGTTTGGTGGAATTACTATAGTGTGTGGAATTGTTGGAACACTAGCAGGAGGTTTCATCCTTGACAAGATAGGGTCTACTATTCCTAATGCTTTCAAGgtaataaaatactatatactccctccatcccataaactaaggagtgcatgttttcagaaaagtcaacattttaaaactttaaccaacaattcaacaaaaa...
species | Zea mays |
transcript | GRMZM2G164743_T01 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: GAGGTTTCATCCTTGACAAGATAGGGTCTACTATTCCTAATGCTTTCAAG CTTCTTTCTGGTGCGACATTTGTAGGGGCAATATTCTGCTTTGGTGCTTTTEST: gi|5325067|gb|AI783258.1|AI783258
genomic: GAGGTTTCATCCTTGACAAGATAGGGTCTACTATTCCTAATGCTTTCAAGgtaataaaat ... ttccctgcagCTTCTTTCTGGTGCGACATTTGTAGGGGCAATATTCTGCTTTGGTGCTTTT
EST: GAGGTTTCATCCTTGACAAGATAGGGTCTACTATTCCTAATGCTTTCAAG CTTCTTTCTGGTGCGACATTTGTAGGGGCAATATTCTGCTTTGGTGCTTTTEST: gi|211002558|gb|FL365524.1|FL365524
genomic: GAGGTTTCATCCTTGACAAGATAGGGTCTACTATTCCTAATGCTTTCAAGgtaataaaat ... ttccctgcagCTTCTTTCTGGTGCGACATTTGTAGGGGCAATATTCTGCTTTGGTGCTTTT
EST: GAGGTTTCATCCTTGACAAGATAGGGTCTACTATTCCTAATGCTTTCAAG CTTCTTTCTGGTGCGACATTTGTAGGGGCAATATTCTGCTTTGGTGCTTTTEST: gi|71429290|gb|DR810340.1|DR810340
genomic: GAGGTTTCATCCTTGACAAGATAGGGTCTACTATTCCTAATGCTTTCAAGgtaataaaat ... ttccctgcagCTTCTTTCTGGTGCGACATTTGTAGGGGCAATATTCTGCTTTGGTGCTTTT
EST: GAGGTTTCATCCTTGACAAGATAGGGTCTACTATTCCTAATGCTTTCAAG CTTCTTTCTGGTGCGACATTTGTAGGGGCAATATTCTGCTTTGGTGCTTTTEST: gi|6056590|gb|AW090995.1|AW090995
genomic: GAGGTTTCATCCTTGACAAGATAGGGTCTACTATTCCTAATGCTTTCAAGgtaataaaat ... ttccctgcagCTTCTTTCTGGTGCGACATTTGTAGGGGCAATATTCTGCTTTGGTGCTTTT
EST: GAGGTTTCATCCTTGACAAGATAGGGTCTACTATTCCTAATGCTTTCAAG CTTCTTTCTGGTGCGACATTTGTAGGGGCAATATTCTGCTTTGGTGCTTTTEST: gi|32907645|gb|CF012458.1|CF012458
genomic: GAGGTTTCATCCTTGACAAGATAGGGTCTACTATTCCTAATGCTTTCAAGgtaataaaat ... ttccctgcagCTTCTTTCTGGTGCGACATTTGTAGGGGCAATATTCTGCTTTGGTGCTTTT
EST: GAGGTTTCATCCTTGACAAGATAGGGTCTACTATTCCTAATGCTTTCAAG CTTCTTTCTGGTGCGACATTTGTAGGGGCAATATTCTGCTTTGGTGCTTTTEST: gi|5846879|gb|AI999962.1|AI999962
genomic: GAGGTTTCATCCTTGACAAGATAGGGTCTACTATTCCTAATGCTTTCAAGgtaataaaat ... ttccctgcagCTTCTTTCTGGTGCGACATTTGTAGGGGCAATATTCTGCTTTGGTGCTTTT
EST: GAGGTTTCATCCTTGACAAGATAGGGTCTACTATTCCTAATGCTTTCAAG CTTCTTTCTGGTGCGACATTTGTAGGGGCAATATTCTGCTTTGGTGCTTTT
genomic: GAGGTTTCATCCTTGACAAGATAGGGTCTACTATTCCTAATGCTTTCAAGgtaataaaat ... ttccctgcagCTTCTTTCTGGTGCGACATTTGTAGGGGCAATATTCTGCTTTGGTGCTTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATGTTTGGTGGAATTACTATAGTGTGTGGAATTGTTGGAACACTAGCAGGAGGTTTCATCCTTGACAAGATAGGGTCTACTATTCCTAATGCTTTCAAGgtaataaaatactatatactccctccatcccataaactaaggagtgcatgttttcagaaaagtcaacattttaaaactttaaccaacaattcaacaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctccctcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cagaaaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -caacaaaa