1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
TCACCCTATTCTTGTGATGTCCCGATGGTTGAAGAGGCCATAGACGCCATCTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAGgttagcaccgccactacaagttcatgaatgagcaaacttctgacgaattagtgatactcccagtttcctttcactggtagactgactaaacactatcctttatcag
species | Zea mays |
transcript | GRMZM2G162461_T01 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: CTGCAAGAGCCAGGGAACACCACCAGATGAGAAGATTGCCATCACCAAAG CTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCAEST: gi|6918395|gb|AW399925.1|AW399925
genomic: CTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAGgttagcaccg ... cctttatcagCTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCA
EST: CTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAG CTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCAEST: gi|32870498|gb|CF010180.1|CF010180
genomic: CTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAGgttagcaccg ... cctttatcagCTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCA
EST: CTGCAAGAGCCAGGGAACACCACCAGATGAGAAGATTGCCATCACCAAAG CTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCAEST: gi|21391040|gb|BQ529089.1|BQ529089
genomic: CTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAGgttagcaccg ... cctttatcagCTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCA
EST: CTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAG CTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCAEST: gi|21390421|gb|BQ528470.1|BQ528470
genomic: CTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAGgttagcaccg ... cctttatcagCTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCA
EST: CTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAG CTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCA
genomic: CTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAGgttagcaccg ... cctttatcagCTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCACCCTATTCTTGTGATGTCCCGATGGTTGAAGAGGCCATAGACGCCATCTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAGgttagcaccgccactacaagttcatgaatgagcaaacttctgacgaattagtgatactcccagtttcctttcactggtagactgactaaacactatcctttatcag
- - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG