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GTGACATCTGGAATGAGTCCAGCTTTCAATCTTTATGGGTGTGCCTTGATTGgtattcatcttcccacccacctttttttctatttttgcatccttgtgcatctcctcttcgatcgcacacaaagcattttctttccaccatggattttatt...
species | Zea mays |
transcript | GRMZM2G108416_T01 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: TCCAGC-TTCAAATCTTTATGGGTGTGCCTTGATTG TGCTTGCAGAGTGGAAACCACCAGTTTATGATAACTTTCATGGGATAAAATEST: gi|211301117|gb|FL169205.1|FL169205
genomic: TCCAGCTTTC-AATCTTTATGGGTGTGCCTTGATTGgtattcatct ... tttggttcagTGCTTGCAGAGTGGAAACCACCAGTTTATGATAACTCTCATGGGATAAAAT
EST: GACATCTGGAATGAGTCCAGCTTTCAATCTTTATGGGTGTGCCTTGATTG TGCTTGCAGAGTGGAAATCACCAGTTTATGATAACTCTCATGGGATAAAATEST: gi|78115926|gb|DV534314.1|DV534314
genomic: GACATCTGGAATGAGTCCAGCTTTCAATCTTTATGGGTGTGCCTTGATTGgtattcatct ... tttggttcagTGCTTGCAGAGTGGAAACCACCAGTTTATGATAACTCTCATGGGATAAAAT
EST: GACATCTGGAATGAGTCCAGCTTTCAATCTTTATGGGTGTGCCTTGATTG TGCTTGCAGAGTGGAAACCACCAGTTTATGATAACTCTCATGGGATAAAAT
genomic: GACATCTGGAATGAGTCCAGCTTTCAATCTTTATGGGTGTGCCTTGATTGgtattcatct ... tttggttcagTGCTTGCAGAGTGGAAACCACCAGTTTATGATAACTCTCATGGGATAAAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGACATCTGGAATGAGTCCAGCTTTCAATCTTTATGGGTGTGCCTTGATTGgtattcatcttcccacccacctttttttctatttttgcatccttgtgcatctcctcttcgatcgcacacaaagcattttctttccaccatggattttatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cccaccc