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GGGTTCCATTCATCCTCAAGGCTGGCAAAGCACTAAATTCGAGGAAAGCAGAGATACGTGTACAGTTCAAGGATGCTCCTGGTGACATTTTTAGATgtaggtaccctgtgtttttcaaattttaaataaatatattattatcattaagtccatccctgattttgactgttatttaccaattccccctgagaacttg...
species | Zea mays |
transcript | GRMZM2G031107_T01 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: AGCAGAGATACGTGTACAGTTCAAGGATGCTCCTGGTGACATTTTTAGAT GCAAGAAACAAGGCAGGAATGAGTTTGTCATACGCCTGCAGCCATCAGAAGEST: gi|6031397|gb|AW076299.1|AW076299
genomic: AGCAGAGATACGTGTACAGTTCAAGGATGCTCCTGGTGACATTTTTAGATgtaggtaccc ... tcttttatagGCAAGAAACAAGGCAGGAATGAGTTTGTCATACGCCTGCAGCCATCAGAAG
EST: AGCAGAGATACGTGTACAGTTCAAGGATGCTCCTGGTGACATTTTTAGAT GCAAGAAACAAGGCAGGAATGAGTTTGTCATACGCCTGCAGCCATCAGAAGEST: gi|71596396|gb|DR907147.1|DR907147
genomic: AGCAGAGATACGTGTACAGTTCAAGGATGCTCCTGGTGACATTTTTAGATgtaggtaccc ... tcttttatagGCAAGAAACAAGGCAGGAATGAGTTTGTCATACGCCTGCAGCCATCAGAAG
EST: AGCAGAGATACGTGTACAGTTCAAGGATGCACCTGGTGACATTTTTAGAT GCAAGAAACAAGGCAGGAATGAGTTTGTCATACGCCTGCAGCCATCAGAAGEST: gi|78077421|gb|DV505855.1|DV505855
genomic: AGCAGAGATACGTGTACAGTTCAAGGATGCTCCTGGTGACATTTTTAGATgtaggtaccc ... tcttttatagGCAAGAAACAAGGCAGGAATGAGTTTGTCATACGCCTGCAGCCATCAGAAG
EST: AGCAGAGATACGTGTACAGTTCAAGGATGCTCCTGGTGACATTTTTAGAT GCAAGAAACAAGGCAGGAATGAGTTTGTCATACGCCTGCAGCCATCAGAAGEST: gi|22521339|gb|BU080150.1|BU080150
genomic: AGCAGAGATACGTGTACAGTTCAAGGATGCTCCTGGTGACATTTTTAGATgtaggtaccc ... tcttttatagGCAAGAAACAAGGCAGGAATGAGTTTGTCATACGCCTGCAGCCATCAGAAG
EST: CCTGGTGACATTTTTAGAT GCAAGAAACAAGGCAGGAATGAGTTTGTCATACGCCTGCAGCCATCAGAAGEST: gi|78119963|gb|DV538347.1|DV538347
genomic: CCTGGTGACATTTTTAGATgtaggtaccc ... tcttttatagGCAAGAAACAAGGCAGGAATGAGTTTGTCATACGCCTGCAGCCATCAGAAG
EST: AGCAGAGATTCGTGTCCAGTTCAAGGATGCTCCTGGTGACATTTTTAGTT GCAAGAAACAAGACAGGAATGAGTTTGTCATTCGCCTGCAGCCATCAGAAGEST: gi|76281884|gb|DV021452.1|DV021452
genomic: AGCAGAGATACGTGTACAGTTCAAGGATGCTCCTGGTGACATTTTTAGATgtaggtaccc ... tcttttatagGCAAGAAACAAGGCAGGAATGAGTTTGTCATACGCCTGCAGCCATCAGAAG
EST: AGCAGAGATACGTGTACAGTTCAAGGATGCTCCTGGTGACATTTTTAGAT GCAAGAAACAAGGCAGGAATGAGTTTGTCATACGCCTGCAGCCATCAGAAGEST: gi|78544145|gb|DV621643.1|DV621643
genomic: AGCAGAGATACGTGTACAGTTCAAGGATGCTCCTGGTGACATTTTTAGATgtaggtaccc ... tcttttatagGCAAGAAACAAGGCAGGAATGAGTTTGTCATACGCCTGCAGCCATCAGAAG
EST: AGCAGAGATACGTGTACAGTTCAAGGATGCTCCTGGTGACATTTTTAGAT GCAAGAAACAAGGCAGGAATGAGTTTGTCATACGCCTGCAGCCATCAGAAGEST: gi|78109019|gb|DV527436.1|DV527436
genomic: AGCAGAGATACGTGTACAGTTCAAGGATGCTCCTGGTGACATTTTTAGATgtaggtaccc ... tcttttatagGCAAGAAACAAGGCAGGAATGAGTTTGTCATACGCCTGCAGCCATCAGAAG
EST: AGCAGAGATACGTGTACAGTTCAAGGATGCTCCTGGTGACATTTTTAGAT GCAAGAAACAAGGCAGGAATGAGTTTGTCATACGCCTGCAGCCATCAGAAG
genomic: AGCAGAGATACGTGTACAGTTCAAGGATGCTCCTGGTGACATTTTTAGATgtaggtaccc ... tcttttatagGCAAGAAACAAGGCAGGAATGAGTTTGTCATACGCCTGCAGCCATCAGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGTTCCATTCATCCTCAAGGCTGGCAAAGCACTAAATTCGAGGAAAGCAGAGATACGTGTACAGTTCAAGGATGCTCCTGGTGACATTTTTAGATgtaggtaccctgtgtttttcaaattttaaataaatatattattatcattaagtccatccctgattttgactgttatttaccaattccccctgagaacttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG