1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
GTATACTTACAAGGTCTGTGCATATAAGAAAGCATCACAGGCTGAAGGGCACAGTTCTACCAACCTGGGgtatgcttattgttcttcttgtttttgctgagttctatttctatttgtaagttaattatatattttttgtatgttattgcggctgtgtttttctaataat...
species | Zea mays |
transcript | AC213600.3_FGT002 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: GCATATAAGAAAGCATCACAGGCTGAAGGGCACAGTTCTACCAACCTGGG GCGGTGGGACAAATTTGAAGATTCGTACAGAGTGATGCACTTTTCAAGTGGEST: gi|67012552|gb|CO441301.1|CO441301
genomic: GCATATAAGAAAGCATCACAGGCTGAAGGGCACAGTTCTACCAACCTGGGgtatgcttat ... ctatcatcagGCGGTGGGACAAATTTGAAGATTCGTACAGAGTGATGCACTTTTCAAGTGG
EST: GCATATAAGAAAGCATCACAGGCTGAAGGGCACAGTTCTACCAACCTGGG GCGGTGGGACAAATTTGAAGATTCGTACAGAGTGATGCACTTTTCAAGTGGEST: gi|32834869|gb|CD974547.1|CD974547
genomic: GCATATAAGAAAGCATCACAGGCTGAAGGGCACAGTTCTACCAACCTGGGgtatgcttat ... ctatcatcagGCGGTGGGACAAATTTGAAGATTCGTACAGAGTGATGCACTTTTCAAGTGG
EST: GCATATAAGAAAGCATCACAGGCTGAAGGGCACAGTTCTACCAACCTGGG GCGGTGGGACAAATTTGAAGATTCGTACEST: gi|211410948|gb|FL407147.1|FL407147
genomic: GCATATAAGAAAGCATCACAGGCTGAAGGGCACAGTTCTACCAACCTGGGgtatgcttat ... ctatcatcagGCGGTGGGACAAATTTGAAGATTCGTAC
EST: GCATATAAGAAAGCATCACAGGCTGAAGGGCACAGTTCTACCAACCTGGG GCGGTGGGACAAATTTGAAGATTCGTACAGAGTGATGCACTTTTCAAGTGGEST: gi|60340979|gb|DN207952.1|DN207952
genomic: GCATATAAGAAAGCATCACAGGCTGAAGGGCACAGTTCTACCAACCTGGGgtatgcttat ... ctatcatcagGCGGTGGGACAAATTTGAAGATTCGTACAGAGTGATGCACTTTTCAAGTGG
EST: GCATATAAGAAAGCATCACAGGCTGAAGGGCACAGTTCTACCAACCTGGG GCGGTGGGACAAATTTGAAGATTCGTACAGAGTGATGCACTTTTCAAGTGGEST: gi|211337107|gb|FL422018.1|FL422018
genomic: GCATATAAGAAAGCATCACAGGCTGAAGGGCACAGTTCTACCAACCTGGGgtatgcttat ... ctatcatcagGCGGTGGGACAAATTTGAAGATTCGTACAGAGTGATGCACTTTTCAAGTGG
EST: GCATATAAGAAAGCATCACAGGCTGAAGGGCACAGTTCTACCAACCTGGG GCGGTGGGACAAATTTGAAGATTCGTACAGAGTGATGCACTTTTCAAGTGG
genomic: GCATATAAGAAAGCATCACAGGCTGAAGGGCACAGTTCTACCAACCTGGGgtatgcttat ... ctatcatcagGCGGTGGGACAAATTTGAAGATTCGTACAGAGTGATGCACTTTTCAAGTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATACTTACAAGGTCTGTGCATATAAGAAAGCATCACAGGCTGAAGGGCACAGTTCTACCAACCTGGGgtatgcttattgttcttcttgtttttgctgagttctatttctatttgtaagttaattatatattttttgtatgttattgcggctgtgtttttctaataat
- - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - CTGAAG