1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
ATCAATCTGACAACAAAAGGCTGTTTGAGCTTGACATTGAGCGTATAGTCCGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAAgtatatatcagagatttattctagttttctgtgaaggatcttctatgttttaagtcatacaaattttgatgtttcccataatcctttgtggtgatgtag
species | Zea mays |
transcript | GRMZM2G451716_T01 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: CGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAA GTACACATCAAAGATGCTTCTGGCAGCTATTGATGAAAGTCACCGGGGAACEST: gi|5895966|gb|AW037212.1|AW037212
genomic: CGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAAgtatatatca ... ggtgatgtagGTACACATCAAAGATGCTTCTGGCAGCTATTGATGAAAGTCACCGGGGAAC
EST: CGGNGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAA GTACACATCAAAGATGCTTCTGGCAGCTATTGATGAAAGTCACCGGGGAACEST: gi|5895962|gb|AW037208.1|AW037208
genomic: CGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAAgtatatatca ... ggtgatgtagGTACACATCAAAGATGCTTCTGGCAGCTATTGATGAAAGTCACCGGGGAAC
EST: CGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAA GTACACATCAAAGATGCTTCTGGCAGCTATTGATGAAAGTCACCGGGGAATEST: gi|213191920|gb|FM183353.1|FM183353
genomic: CGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAAgtatatatca ... ggtgatgtagGTACACATCAAAGATGCTTCTGGCAGCTATTGATGAAAGTCACCGGGGAAC
EST: CGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAA GTACACATCAAAGATGCTTCTGGCAGCTATTGATGAAAGTCACCGGGGAACEST: gi|76928188|gb|DV171510.1|DV171510
genomic: CGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAAgtatatatca ... ggtgatgtagGTACACATCAAAGATGCTTCTGGCAGCTATTGATGAAAGTCACCGGGGAAC
EST: CGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAA GTACACATCAAAGATGCTTCTGGCAGCTATTGATGAAAGTCACCGGGGAACEST: gi|31358340|gb|CD442697.1|CD442697
genomic: CGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAAgtatatatca ... ggtgatgtagGTACACATCAAAGATGCTTCTGGCAGCTATTGATGAAAGTCACCGGGGAAC
EST: CGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAA GTACACATCAAAGATGCTTCTGGCAGCTATTGATGAAAGTCACCGGGGAACEST: gi|71301676|gb|DR786905.1|DR786905
genomic: CGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAAgtatatatca ... ggtgatgtagGTACACATCAAAGATGCTTCTGGCAGCTATTGATGAAAGTCACCGGGGAAC
EST: CGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAA GTACACATCAAAGATGCTTCTGGCAGCTATTGATGAAAGTCACCGGGGAACEST: gi|91048864|gb|EB159282.1|EB159282
genomic: CGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAAgtatatatca ... ggtgatgtagGTACACATCAAAGATGCTTCTGGCAGCTATTGATGAAAGTCACCGGGGAAC
EST: CGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAA GTACACATCAAAGATGCTTCTGGCAGCTATTGATGAAAGTCACCGGGGAAC
genomic: CGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAAgtatatatca ... ggtgatgtagGTACACATCAAAGATGCTTCTGGCAGCTATTGATGAAAGTCACCGGGGAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCAATCTGACAACAAAAGGCTGTTTGAGCTTGACATTGAGCGTATAGTCCGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAAgtatatatcagagatttattctagttttctgtgaaggatcttctatgttttaagtcatacaaattttgatgtttcccataatcctttgtggtgatgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA