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GTTGATACTTTACCATCAACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAAgtatcctttctcccgactttcaccattttaatgtttaagctattaaaaatagattactcacaacacctatgttgccattagttattttcatgaccaagct...
species | Zea mays |
transcript | GRMZM2G351582_T01 |
intron # | 11 |
splice site | 5' |
intron type | U12 (go to U12 genes for details) |
EST: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCGACAA AAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGTEST: gi|211282780|gb|FL192971.1|FL192971
genomic: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAAgtatcctttc ... cttttgctagAAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGT
EST: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAA AAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGTEST: gi|30306974|gb|CD001647.1|CD001647
genomic: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAAgtatcctttc ... cttttgctagAAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGT
EST: AACATGTGGAGCCTG-GG-ACAGAATGCGTCACACGTTTCTTTGCTACAA AAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGTEST: gi|78085694|gb|DV514087.1|DV514087
genomic: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAAgtatcctttc ... cttttgctagAAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGT
EST: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAA AAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGTEST: gi|31611962|gb|CD568584.1|CD568584
genomic: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAAgtatcctttc ... cttttgctagAAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGT
EST: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAA AAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGTEST: gi|37401209|gb|CF637968.1|CF637968
genomic: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAAgtatcctttc ... cttttgctagAAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGT
EST: GAGCCTGTGGAACAGAATGTGTCACACGTTTCTTTGCTACAA AAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGTEST: gi|67020485|gb|CO449234.1|CO449234
genomic: GAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAAgtatcctttc ... cttttgctagAAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGT
EST: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAA AAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGTEST: gi|60395671|gb|DN228541.1|DN228541
genomic: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAAgtatcctttc ... cttttgctagAAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGT
EST: TGGAACAGAATGCGTCACACGTTTCTTTGCTACAA AAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGTEST: gi|29946582|gb|CB816222.1|CB816222
genomic: TGGAACAGAATGCGTCACACGTTTCTTTGCTACAAgtatcctttc ... cttttgctagAAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGT
EST: AACATG-GGAGCCTG-GGAACAGAATGCGTCACACGTTTCTTTGCTACAA AAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGTEST: gi|211282782|gb|FL192973.1|FL192973
genomic: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAAgtatcctttc ... cttttgctagAAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGT
EST: AACATGTGGAGCCTGTGGAACARAATGCGTCACACGTTTCTTTGCTACAA AAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGTEST: gi|28568977|gb|CB280852.1|CB280852
genomic: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAAgtatcctttc ... cttttgctagAAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGT
EST: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAA AAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGTEST: gi|211367140|gb|FL432365.1|FL432365
genomic: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAAgtatcctttc ... cttttgctagAAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGT
EST: AACATGTGGAGCCTGTGGAACAGAATGCGTCMCACGTTTCTTTGCGACAA AAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGTEST: gi|60357973|gb|DN224946.1|DN224946
genomic: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAAgtatcctttc ... cttttgctagAAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGT
EST: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAA AAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGT
genomic: AACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAAgtatcctttc ... cttttgctagAAATCCCATATTTCCGGGAGGTGATTGTTATGGCAACAACATGTGACATGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGATACTTTACCATCAACATGTGGAGCCTGTGGAACAGAATGCGTCACACGTTTCTTTGCTACAAgtatcctttctcccgactttcaccattttaatgtttaagctattaaaaatagattactcacaacacctatgttgccattagttattttcatgaccaagct
- - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaatag