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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGACGATTCTGCAGGCAATCTCCTTGCTAGCTCCTGTCATGGGTGCAGAAATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgactagaagaatgttaaagaaaaatctaatcttgtcagtttctgaacaacatggtctaaaatttttcag

Basic information

species Zea mays
transcript GRMZM2G164352_T04
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|37385657|gb|CF629982.1|CF629982
EST:     ATCTCCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|6194677|gb|AW146781.1|AW146781
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|18169181|gb|BM339021.1|BM339021
EST:     CACCTGTCAAAAGCATGCTTCCAGTCGATCATTAATTCTTCAAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: CACCTGTCAAAAGC-TGCTTCCAGTCG-TCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|67016540|gb|CO445289.1|CO445289
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|32847987|gb|CD987668.1|CD987668
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGT
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGT
EST: gi|4647623|gb|AI622698.1|AI622698
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTNGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|4886133|gb|AI677253.1|AI677253
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|32929892|gb|CF034704.1|CF034704
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGT
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGT
EST: gi|31362531|gb|CD446888.1|CD446888
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|37400099|gb|CF637395.1|CF637395
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|67017790|gb|CO446539.1|CO446539
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|32933390|gb|CF038202.1|CF038202
EST:     ATCACTTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCAAAGGACAG                         GGTTCCTAACATCAAGTTCAACGTTGC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGC
EST: gi|37401589|gb|CF638162.1|CF638162
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|31360934|gb|CD445291.1|CD445291
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|4966839|gb|AI691695.1|AI691695
EST:     ATCCCCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|149075393|gb|EE163907.2|EE163907
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTTTTTGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGGGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|32847664|gb|CD987345.1|CD987345
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTAC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTAC
EST: gi|28931026|gb|CB334387.1|CB334387
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|21391215|gb|BQ529264.1|BQ529264
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|60346737|gb|DN213710.1|DN213710
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|32939366|gb|CF044185.1|CF044185
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGT
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGT
EST: gi|211384211|gb|FL475814.1|FL475814
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|13557744|gb|BG549100.1|BG549100
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|12970893|gb|BG267211.1|BG267211
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|211206779|gb|FL154155.1|FL154155
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|60348170|gb|DN215143.1|DN215143
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|33103273|gb|CF063233.1|CF063233
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCAAAAGTAC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTAC
EST: gi|24764008|gb|CA399177.1|CA399177
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|78025689|gb|DV494076.1|DV494076
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|60400129|gb|DN232936.1|DN232936
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|32907549|gb|CF012362.1|CF012362
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTCGCGAAAGTACTGCAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|32838745|gb|CD978426.1|CD978426
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGT
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGT
EST: gi|60344803|gb|DN211776.1|DN211776
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|149000780|gb|EE038003.2|EE038003
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|40303778|gb|CK348165.1|CK348165
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|32928724|gb|CF033536.1|CF033536
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGT
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGT
EST: gi|6989629|gb|AW447842.1|AW447842
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|67022121|gb|CO450870.1|CO450870
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|15590039|gb|BI674655.1|BI674655
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|60400542|gb|DN233349.1|DN233349
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|33095990|gb|CF055984.1|CF055984
EST:     ATCACCTGTCAAAAGCTGCTACCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|29130087|gb|CB380791.1|CB380791
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|32846843|gb|CD986524.1|CD986524
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGGTTCCCAACATCAAGTTCAATGTTGCAAAAGT
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGG-TTCCCAACATCAAGTTCAATGTTGCGAAAGT
EST: gi|8930129|gb|BE224773.1|BE224773
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|60346645|gb|DN213618.1|DN213618
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|67039515|gb|CO465770.1|CO465770
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAAGACAG                         GGTTCCCAACATCCAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|24767244|gb|CA402388.1|CA402388
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|20513030|gb|BQ280216.1|BQ280216
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|24769523|gb|CA404652.1|CA404652
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|67033917|gb|CO462666.1|CO462666
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGTACTACAGTCACTTGTACC
EST: gi|32839365|gb|CD979046.1|CD979046
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGTTCCCAACACCAAGTTCAATGTTGCGAAAGT
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGGTTCCCAACATCAAGTTCAATGTTGCGAAAGT
EST: gi|33102660|gb|CF062620.1|CF062620
EST:     ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAG                         GGGTTCCCAACATCAAGTTCAATGTTGCAAAAGTAC
genomic: ATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgact ... aatttttcagGG-TTCCCAACATCAAGTTCAATGTTGCGAAAGTAC

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TGACGATTCTGCAGGCAATCTCCTTGCTAGCTCCTGTCATGGGTGCAGAAATCACCTGTCAAAAGCTGCTTCCAGTCGTCATTAATTCTTCGAAGGACAGgtgtgtgactagaagaatgttaaagaaaaatctaatcttgtcagtttctgaacaacatggtctaaaatttttcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT