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GGCTCAACAACAGTAACCTGGACACGTGTCTCATTGGAGCTATCTCGgcaagtacctaataactagacagacctgacctagtctctctctgtcgttattaatcttctaataaccgcatcccatcag
species | Zea mays |
transcript | GRMZM2G160430_T01 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: GGCTCAAGAACAGTAACCTGGACACGTGTCTCATTGGAGCTATCTCG GTTCTTGCCACTGGTGTCACAACCACGATCTTGGACAGAGCTGGCCGGAGAEST: gi|32832825|gb|CD972503.1|CD972503
genomic: GGCTCAACAACAGTAACCTGGACACGTGTCTCATTGGAGCTATCTCGgcaagtacct ... atcccatcagGTTCTTGCCACTGGTGTCACAACCACGATCTTGGACAGAGCTGGCCGGAGA
EST: GGCTCAACAACAGTAACCTGGACACGTGTCTCATTGGAGCTATCTCG GTTCTTGCCACTGGTGTCACAACCACGATCTTGGACAGAGCTGGCCGGAGAEST: gi|101387701|gb|EB815865.1|EB815865
genomic: GGCTCAACAACAGTAACCTGGACACGTGTCTCATTGGAGCTATCTCGgcaagtacct ... atcccatcagGTTCTTGCCACTGGTGTCACAACCACGATCTTGGACAGAGCTGGCCGGAGA
EST: GGCTCAACAACAGTAACCTGGACACGTGTCTCATTGGAGCTATCTCG GTTCTTGCCACTGGTGTCACAACCACGATCTTGGACAGAGCTGGCCGGAGAEST: gi|37385615|gb|CF629958.1|CF629958
genomic: GGCTCAACAACAGTAACCTGGACACGTGTCTCATTGGAGCTATCTCGgcaagtacct ... atcccatcagGTTCTTGCCACTGGTGTCACAACCACGATCTTGGACAGAGCTGGCCGGAGA
EST: CTCATTGGAGCTATCTCG GTTCTTGCCACTGGTGTCACAACCACGATCTTGGACAGAGCTGGCCGGAGAEST: gi|32927095|gb|CF031907.1|CF031907
genomic: CTCATTGGAGCTATCTCGgcaagtacct ... atcccatcagGTTCTTGCCACTGGTGTCACAACCACGATCTTGGACAGAGCTGGCCGGAGA
EST: GGCTCAACAACAGTAACCTGGACACGTGTCTCATTGGAGCTATCTCG GTTCTTGCCACTGGTGTCACAACCACGATCTTGGACAGAGCTGGCCGGAGAEST: gi|148950293|gb|EC895852.2|EC895852
genomic: GGCTCAACAACAGTAACCTGGACACGTGTCTCATTGGAGCTATCTCGgcaagtacct ... atcccatcagGTTCTTGCCACTGGTGTCACAACCACGATCTTGGACAGAGCTGGCCGGAGA
EST: GGCTCAACAACAGTAACCTGGACACGTGTCTCATTGGAGCTATCTCG GTTCTTGCCACTGGTGTCACAACCACGATCTTGGACAGAGCTGGCCGGAGAEST: gi|5846979|gb|AW000058.1|AW000058
genomic: GGCTCAACAACAGTAACCTGGACACGTGTCTCATTGGAGCTATCTCGgcaagtacct ... atcccatcagGTTCTTGCCACTGGTGTCACAACCACGATCTTGGACAGAGCTGGCCGGAGA
EST: GGCTCAAGAACAGTAACCTGGACACGTGTCTCATTGGAGCTATCTCG GTTCTTGCCACTGGTGTCACAACCACGATCTTGGACAGAGCTGGCCGGAGA
genomic: GGCTCAACAACAGTAACCTGGACACGTGTCTCATTGGAGCTATCTCGgcaagtacct ... atcccatcagGTTCTTGCCACTGGTGTCACAACCACGATCTTGGACAGAGCTGGCCGGAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCTCAACAACAGTAACCTGGACACGTGTCTCATTGGAGCTATCTCGgcaagtacctaataactagacagacctgacctagtctctctctgtcgttattaatcttctaataaccgcatcccatcag
- - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - GGAGCT